RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 PCDHA2Q9Y5H9 948 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 TRPV2Q9Y5S1 764 aa15.77■□□□□ 0.12
CXCL12-202ENST00000374426 NFASCO94856 1347 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 CNTNAP5Q8WYK1 1306 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 LINC01565O15544 149 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 MBTPS2O43462 519 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 ITGB1P05556 798 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 ARP10275 920 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 DNAJB1P25685 340 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 STAT5BP51692 787 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 ITGB3BPQ13352 177 aaPredicted RBP15.76■□□□□ 0.11
CXCL12-202ENST00000374426 NPAS4Q8IUM7 802 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 CMTR2Q8IYT2 770 aaKnown RBP15.76■□□□□ 0.11
CXCL12-202ENST00000374426 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 SDF4Q9BRK5 362 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 IGFLR1Q9H665 355 aa15.76■□□□□ 0.11
CXCL12-202ENST00000374426 SMIM35A0A1B0GVV1 85 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 M0QZ92 97 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 NAPAP54920 295 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 FUT2Q10981 343 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 PAK2Q13177 524 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 ADAM15Q13444 863 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
CXCL12-202ENST00000374426 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 PAN2Q504Q3 1202 aaKnown RBP15.75■□□□□ 0.11
CXCL12-202ENST00000374426 CEP55Q53EZ4 464 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 APOA5Q6Q788 366 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 SPPL3Q8TCT6 385 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
CXCL12-202ENST00000374426 CELF4Q9BZC1 486 aaKnown RBP15.75■□□□□ 0.11
CXCL12-202ENST00000374426 TMX1Q9H3N1 280 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 AGO4Q9HCK5 861 aaKnown RBP15.75■□□□□ 0.11
CXCL12-202ENST00000374426 RIC8AQ9NPQ8 531 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 ZNF318Q5VUA4 2279 aa15.75■□□□□ 0.11
CXCL12-202ENST00000374426 KDM3AQ9Y4C1 1321 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 MEIS1O00470 390 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 ATG7O95352 703 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 SCG2P13521 617 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 GATMP50440 423 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 TMEM266Q2M3C6 531 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 NAALADL2Q58DX5 795 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 PPP1R18Q6NYC8 613 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 ADGRD2Q7Z7M1 963 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 TEX2Q8IWB9 1127 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 KLHL23Q8NBE8 558 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 UPF3BQ9BZI7 483 aaKnown RBP15.74■□□□□ 0.11
CXCL12-202ENST00000374426 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
CXCL12-202ENST00000374426 LOXHD1Q8IVV2 1947 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 IGKV6D-21A0A0A0MT36 114 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 STXBP3O00186 592 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 CCNE2O96020 404 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 FOSP01100 380 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-202ENST00000374426 STAG3L1P0CL83 205 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 SREBF1P36956 1147 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 SLC26A2P50443 739 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 KRT76Q01546 638 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 NME8Q8N427 588 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 MSLNLQ96KJ4 702 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 POP1Q99575 1024 aaKnown RBP15.73■□□□□ 0.11
CXCL12-202ENST00000374426 RBM28Q9NW13 759 aaKnown RBP15.73■□□□□ 0.11
CXCL12-202ENST00000374426 TMEM260Q9NX78 707 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 BRPF3Q9ULD4 1205 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 V9GY48 417 aaPredicted RBP15.73■□□□□ 0.11
CXCL12-202ENST00000374426 TECTAO75443 2155 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 KIAA1671Q9BY89 1806 aa15.73■□□□□ 0.11
CXCL12-202ENST00000374426 MGEA5O60502 916 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 EYA4O95677 639 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 KLRC1P26715 233 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
CXCL12-202ENST00000374426 NDUFV1P49821 464 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 ADCY7P51828 1080 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 EXOSC10Q01780 885 aaKnown RBP15.72■□□□□ 0.11
CXCL12-202ENST00000374426 RTN1Q16799 776 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 ABHD15Q6UXT9 468 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 HFE2Q6ZVN8 426 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 EFHBQ8N7U6 833 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 POF1BQ8WVV4 589 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 TMEM40Q8WWA1 233 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 PPP2R3CQ969Q6 453 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 TCEANC2Q96MN5 208 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 CDHR5Q9HBB8 845 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 CLEC1BQ9P126 229 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 MUTYHQ9UIF7 546 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 ZDBF2Q9HCK1 2354 aa15.72■□□□□ 0.11
CXCL12-202ENST00000374426 SMCO2A6NFE2 343 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 DDX39AO00148 427 aaKnown RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 HBP1O60381 514 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 SARSP49591 514 aaKnown RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 NFX1Q12986 1120 aaKnown RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 AP3B2Q13367 1082 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 HERC4Q5GLZ8 1057 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 RNF135Q8IUD6 432 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 CCDC60Q8IWA6 550 aaPredicted RBP15.71■□□□□ 0.11
CXCL12-202ENST00000374426 KIAA0319LQ8IZA0 1049 aa15.71■□□□□ 0.11
CXCL12-202ENST00000374426 SMRP1Q8NCR6 262 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms