RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 PUM1Q14671 1186 aaKnown RBP eCLIP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 NR1I3Q14994 352 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 OVOS1Q6IE37 1185 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 ZC3H14Q6PJT7 736 aaKnown RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 TMEM52Q8NDY8 209 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 PLBD2Q8NHP8 589 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 MAP4K1Q92918 833 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 EAF1Q96JC9 268 aaPredicted RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 TTC14Q96N46 770 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 TEX13AQ9BXU3 409 aaPredicted RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 BRMS1Q9HCU9 246 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 IL1RAPL2Q9NP60 686 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 MYRFQ9Y2G1 1151 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 CYP46A1Q9Y6A2 500 aa6.31□□□□□ -1.4
LINC00474-201ENST00000374014 KDM6AO15550 1401 aaPredicted RBP6.31□□□□□ -1.4
LINC00474-201ENST00000374014 KCNQ3O43525 872 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 IGKV5-2P06315 115 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 HMGB1P09429 215 aaKnown RBP6.3□□□□□ -1.4
LINC00474-201ENST00000374014 CTSKP43235 329 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
LINC00474-201ENST00000374014 ZNF200P98182 395 aaPredicted RBP6.3□□□□□ -1.4
LINC00474-201ENST00000374014 NECTIN1Q15223 517 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 ZSCAN23Q3MJ62 389 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 UBXN11Q5T124 520 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 LRSAM1Q6UWE0 723 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 AACSQ86V21 672 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 UNC5CLQ8IV45 518 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 RGS22Q8NE09 1264 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 GPR20Q99678 358 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 GZF1Q9H116 711 aaPredicted RBP6.3□□□□□ -1.4
LINC00474-201ENST00000374014 BICC1Q9H694 974 aaKnown RBP6.3□□□□□ -1.4
LINC00474-201ENST00000374014 CNNM2Q9H8M5 875 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 ZDHHC9Q9Y397 364 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 SNX14Q9Y5W7 946 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 JCADQ9P266 1359 aa6.3□□□□□ -1.4
LINC00474-201ENST00000374014 CCDC171Q6TFL3 1326 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 WDR17Q8IZU2 1322 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 LAMB4A4D0S4 1761 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 RGPD2P0DJD1 1756 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 ZBTB7CA1YPR0 619 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 K7ESM1 405 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 VAV1P15498 845 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 CCNFP41002 786 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 MVKQ03426 396 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 TARBP2Q15633 366 aaKnown RBP6.29□□□□□ -1.4
LINC00474-201ENST00000374014 VWA3BQ502W6 1294 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 CWC27Q6UX04 472 aaKnown RBP6.29□□□□□ -1.4
LINC00474-201ENST00000374014 RUFY3Q7L099 469 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 COPS6Q7L5N1 327 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 LRP10Q7Z4F1 713 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 ZGPATQ8N5A5 531 aaKnown RBP6.29□□□□□ -1.4
LINC00474-201ENST00000374014 CCDC191Q8NCU4 936 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC00474-201ENST00000374014 ATG4CQ96DT6 458 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 KAZALD1Q96I82 304 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 SUCLG2Q96I99 432 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 ZNF496Q96IT1 587 aaPredicted RBP6.29□□□□□ -1.4
LINC00474-201ENST00000374014 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 SUSD2Q9UGT4 822 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 PALD1Q9ULE6 856 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 MEGF6O75095 1541 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 ABCC12Q96J65 1359 aa6.29□□□□□ -1.4
LINC00474-201ENST00000374014 CYP27B1O15528 508 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 STX6O43752 255 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 CIAO1O76071 339 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 MSL3P1P0C860 447 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 IL15P40933 162 aaPredicted RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 TERF1P54274 439 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 ZC3H6P61129 1189 aaKnown RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 UBE2HP62256 183 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 PROSER3Q2NL68 480 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 FBXL19Q6PCT2 694 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 LSRQ86X29 649 aaPredicted RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 ADGRG2Q8IZP9 1017 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 ZCRB1Q8TBF4 217 aaKnown RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 FNIP1Q8TF40 1166 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 EAF2Q96CJ1 260 aaPredicted RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 PDLIM2Q96JY6 352 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 PDRG1Q9NUG6 133 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 USP40Q9NVE5 1235 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 FBXL21Q9UKT6 434 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 KIF3AQ9Y496 699 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 RPAP1Q9BWH6 1393 aaPredicted RBP6.28□□□□□ -1.4
LINC00474-201ENST00000374014 MED23Q9ULK4 1368 aa6.28□□□□□ -1.4
LINC00474-201ENST00000374014 ELP1O95163 1332 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 A0A1W2PQ27 194 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 A0A1W2PQ64 194 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 A0A1W2PQC6 194 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 A0A1W2PQD8 194 aa6.27□□□□□ -1.41
LINC00474-201ENST00000374014 PLA2G1BP04054 148 aaKnown RBP6.27□□□□□ -1.41
LINC00474-201ENST00000374014 IL2RBP14784 551 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms