RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 TRPV2Q9Y5S1 764 aa9.32□□□□□ -0.92
RNU4-59P-201ENST00000364447 EVPLQ92817 2033 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 C5orf67F2Z3F1 127 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 MEIS1O00470 390 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CSPG5O95196 566 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 RB1P06400 928 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 STAG3L1P0CL83 205 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CDC27P30260 824 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 METAP2P50579 478 aaKnown RBP eCLIP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 RCAN1P53805 252 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 KRT76Q01546 638 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 ITGB3BPQ13352 177 aaPredicted RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 TMEM31Q5JXX7 168 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 JAKMIP3Q5VZ66 844 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 MCTP2Q6DN12 878 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 NIPA1Q7RTP0 329 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 PLA2G4DQ86XP0 818 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 NPAS4Q8IUM7 802 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM178BQ8IXR5 827 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 GJD3Q8N144 294 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CCDC12Q8WUD4 166 aaPredicted RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CLP1Q92989 425 aaKnown RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 PABPC5Q96DU9 382 aaKnown RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CELF4Q9BZC1 486 aaKnown RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 LMAN2LQ9H0V9 348 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 EPHX3Q9H6B9 360 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 AGO3Q9H9G7 860 aaKnown RBP9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 CLDND1Q9NY35 253 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 HCN4Q9Y3Q4 1203 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 SQORQ9Y6N5 450 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
RNU4-59P-201ENST00000364447 COL1A2P08123 1366 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 MYO7AQ13402 2215 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 SMIM35A0A1B0GVV1 85 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 IPO5O00410 1097 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 GRM6O15303 877 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 NCK2O43639 380 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 HBP1O60381 514 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 DGKIO75912 1065 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 ATG7O95352 703 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 SCG2P13521 617 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 IL9P15248 144 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 KLRC1P26715 233 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 CLK2P49760 499 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 APOBRQ0VD83 1088 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 PFKFB3Q16875 520 aaPredicted RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 PAN2Q504Q3 1202 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 MIS18BP1Q6P0N0 1132 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 PDXDC2PQ6P474 469 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 MTHFD1LQ6UB35 978 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 CMTR2Q8IYT2 770 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 REXO1Q8N1G1 1221 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 NME8Q8N427 588 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 NEK9Q8TD19 979 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 ZNF689Q96CS4 500 aaPredicted RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM122AQ96E09 287 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 LRFN3Q9BTN0 628 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 RC3H2Q9HBD1 1191 aaKnown RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 C6orf50Q9HD87 102 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 CD320Q9NPF0 282 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 ZNF302Q9NR11 478 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM217BQ9NTX9 383 aaPredicted RBP9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 LRFN2Q9ULH4 789 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 PADI3Q9ULW8 664 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 GINS2Q9Y248 185 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 WDR81Q562E7 1941 aa9.3□□□□□ -0.92
RNU4-59P-201ENST00000364447 IGKV6D-21A0A0A0MT36 114 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 ESYT2A0FGR8 921 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM86C2PA6NEL3 165 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM86B1E9PN63 330 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 CCNE2O96020 404 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 MMP1P03956 469 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 FAM86B2P0C5J1 330 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 LINC00271P0C7V0 271 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 CPA1P15085 419 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 PLA2G5P39877 138 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 SETQ01105 290 aaPredicted RBP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 AKAP17AQ02040 695 aaKnown RBP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 NFX1Q12986 1120 aaKnown RBP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 TMEM266Q2M3C6 531 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 ODR4Q5SWX8 454 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 SWSAP1Q6NVH7 229 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 BLOC1S2Q6QNY1 142 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 ABHD15Q6UXT9 468 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 Q6ZUG5 572 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 CCDC60Q8IWA6 550 aaPredicted RBP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 ATP8B4Q8TF62 1192 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 LINC01599Q8WXQ3 324 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 KHSRPQ92945 711 aaKnown RBP eCLIP9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 BRF1Q92994 677 aa9.29□□□□□ -0.92
RNU4-59P-201ENST00000364447 P2RX5Q93086 422 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms