RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Cul5Q9D5V5 780 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Arl6ip4Q9JM93 229 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gm28036V9GXJ1 658 aa17.69■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tnfrsf11aO35305 625 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Kcnu1O54982 1121 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Lrrc4cQ8C031 640 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Kif17Q99PW8 1038 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Adgrf5G5E8Q8 1348 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ltbp1Q8CG19 1712 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Btbd18A0A0A6YY25 723 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Klhdc7aA2APT9 773 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Rps6ka1P18653 724 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Spout1Q3UHX9 385 aaKnown RBP17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Camsap3Q80VC9 1252 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Nop9Q8BMC4 636 aaKnown RBP17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Rint1Q8BZ36 792 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 SltmQ8CH25 1031 aaKnown RBP17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Alpk1Q9CXB8 1231 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Rabl3Q9D4V7 236 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 3830403N18RikQ9D6C3 208 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ddx25Q9QY15 484 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ttc38A3KMP2 465 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 4930523C07RikE9Q2T4 99 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ncf2O70145 525 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Myo1fP70248 1099 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gjb6P70689 261 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Fhdc1Q3ULZ2 1149 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Drc1Q3USS3 753 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Zbtb17Q60821 794 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ttc22Q8C159 568 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Xrcc4Q924T3 326 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Smtnl1Q99LM3 459 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 MefvQ9JJ26 767 aa17.68■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gm45261A0A1B0GSP6 197 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 AurkbO70126 345 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gas1Q01721 343 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ncf1Q09014 390 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Rexo2Q9D8S4 237 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Sept3Q9Z1S5 350 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Zfp213E9QAW0 468 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Atp6v0a2P15920 856 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Mgat1P27808 447 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Trmt2aQ8BNV1 574 aaKnown RBP17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ttll1Q91V51 423 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Yipf1Q91VU1 306 aa17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Myh10Q61879 1976 aaKnown RBP17.67■□□□□ 0.42
Trim28-201ENSMUST00000005705 Fbf1A2A870 1173 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gsg1l2M0QWL6 290 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tnnc1P19123 161 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Serpinc1P32261 465 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Nr2e1Q64104 385 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Aldh5a1Q8BWF0 523 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tbx22Q8K402 517 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Atp6v0a4Q920R6 833 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 ArpinQ9D0A3 226 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Fam129cD3YZB0 591 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Dab2ipQ3UHC7 1189 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ccdc40Q8BI79 1192 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cmtr1Q9DBC3 837 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Klra10Q9R1G6 266 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gys1Q9Z1E4 738 aaKnown RBP17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Sema3fO88632 785 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gja5Q01231 358 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Git1Q68FF6 770 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Usp17leQ7M764 540 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Calcoco1Q8CGU1 691 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Commd10Q8JZY2 202 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Mis12Q9CY25 206 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Erp44Q9D1Q6 406 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 Scgb2b12S4R2L0 112 aa17.66■□□□□ 0.42
Trim28-201ENSMUST00000005705 4930544D05RikJ3QK56 214 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cetn3O35648 167 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Gdpd4Q3TT99 632 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Micall1Q8BGT6 870 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Bhmt2Q91WS4 363 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Znf654Q9DAU9 571 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cpne8Q9DC53 577 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Sec14l1A8Y5H7 715 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 ProcP33587 460 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Traf5P70191 558 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Atp8a1P70704 1164 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Sox13Q04891 613 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Krt35Q497I4 455 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cyfip2Q5SQX6 1253 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Ccdc50Q810U5 305 aaKnown RBP17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Fam118bQ8C569 351 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 HyiQ8R1F5 277 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Pramef12Q9D2F1 463 aa17.65■□□□□ 0.42
Trim28-201ENSMUST00000005705 Clrn2B2RVW2 232 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 MagohP61327 146 aaKnown RBP17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 PRAG1Q571I4 1179 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 Cnnm4Q69ZF7 771 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 Rassf6Q80UQ2 353 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 TxlnbQ8VBT1 685 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 Aipl1Q924K1 328 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 MagohbQ9CQL1 146 aa17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 Tjp2Q9Z0U1 1167 aaKnown RBP17.64■□□□□ 0.42
Trim28-201ENSMUST00000005705 Dock5B2RY04 1868 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Rfpl4bJ3QPR6 266 aa17.64■□□□□ 0.41
Trim28-201ENSMUST00000005705 Ercc5P35689 1170 aa17.64■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 91.2 ms