Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Gm25239-201ENSMUST00000174915 86 ntBASIC37.48■■■■□ 3.59
3830403N18RikQ9D6C3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
3830403N18RikQ9D6C3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
3830403N18RikQ9D6C3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
3830403N18RikQ9D6C3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
3830403N18RikQ9D6C3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
3830403N18RikQ9D6C3 Psd-208ENSMUST00000224556 2034 ntBASIC33.7■■■□□ 2.99
3830403N18RikQ9D6C3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
3830403N18RikQ9D6C3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.5■■■□□ 2.95
3830403N18RikQ9D6C3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
3830403N18RikQ9D6C3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
3830403N18RikQ9D6C3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.86■■■□□ 2.85
3830403N18RikQ9D6C3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
3830403N18RikQ9D6C3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
3830403N18RikQ9D6C3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.56■■■□□ 2.8
3830403N18RikQ9D6C3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
3830403N18RikQ9D6C3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
3830403N18RikQ9D6C3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
3830403N18RikQ9D6C3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
3830403N18RikQ9D6C3 Gm24109-201ENSMUST00000175489 103 ntBASIC32.14■■■□□ 2.74
3830403N18RikQ9D6C3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
3830403N18RikQ9D6C3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
3830403N18RikQ9D6C3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
3830403N18RikQ9D6C3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
3830403N18RikQ9D6C3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
3830403N18RikQ9D6C3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.69■■■□□ 2.66
3830403N18RikQ9D6C3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
3830403N18RikQ9D6C3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
3830403N18RikQ9D6C3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
3830403N18RikQ9D6C3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
3830403N18RikQ9D6C3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
3830403N18RikQ9D6C3 Gm23366-201ENSMUST00000175022 89 ntBASIC31.45■■■□□ 2.63
3830403N18RikQ9D6C3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
3830403N18RikQ9D6C3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.42■■■□□ 2.62
3830403N18RikQ9D6C3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
3830403N18RikQ9D6C3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
3830403N18RikQ9D6C3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
3830403N18RikQ9D6C3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
3830403N18RikQ9D6C3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
3830403N18RikQ9D6C3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
3830403N18RikQ9D6C3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
3830403N18RikQ9D6C3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
3830403N18RikQ9D6C3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.9■■■□□ 2.54
3830403N18RikQ9D6C3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
3830403N18RikQ9D6C3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.76■■■□□ 2.51
3830403N18RikQ9D6C3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.73■■■□□ 2.51
3830403N18RikQ9D6C3 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.7■■■□□ 2.5
3830403N18RikQ9D6C3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
3830403N18RikQ9D6C3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
3830403N18RikQ9D6C3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
3830403N18RikQ9D6C3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
3830403N18RikQ9D6C3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
3830403N18RikQ9D6C3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.34■■■□□ 2.45
3830403N18RikQ9D6C3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
3830403N18RikQ9D6C3 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.26■■■□□ 2.44
3830403N18RikQ9D6C3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
3830403N18RikQ9D6C3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
3830403N18RikQ9D6C3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
3830403N18RikQ9D6C3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
3830403N18RikQ9D6C3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
3830403N18RikQ9D6C3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.96■■■□□ 2.39
3830403N18RikQ9D6C3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
3830403N18RikQ9D6C3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
3830403N18RikQ9D6C3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
3830403N18RikQ9D6C3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
3830403N18RikQ9D6C3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
3830403N18RikQ9D6C3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
3830403N18RikQ9D6C3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
3830403N18RikQ9D6C3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
3830403N18RikQ9D6C3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
3830403N18RikQ9D6C3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.73■■■□□ 2.35
3830403N18RikQ9D6C3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
3830403N18RikQ9D6C3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.63■■■□□ 2.33
3830403N18RikQ9D6C3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
3830403N18RikQ9D6C3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
3830403N18RikQ9D6C3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.55■■■□□ 2.32
3830403N18RikQ9D6C3 Gm27325-201ENSMUST00000175467 74 ntBASIC29.49■■■□□ 2.31
3830403N18RikQ9D6C3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
3830403N18RikQ9D6C3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
3830403N18RikQ9D6C3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
3830403N18RikQ9D6C3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
3830403N18RikQ9D6C3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
3830403N18RikQ9D6C3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
3830403N18RikQ9D6C3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
3830403N18RikQ9D6C3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
3830403N18RikQ9D6C3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.33■■■□□ 2.29
3830403N18RikQ9D6C3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
3830403N18RikQ9D6C3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.3■■■□□ 2.28
3830403N18RikQ9D6C3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.27
3830403N18RikQ9D6C3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.17■■■□□ 2.26
3830403N18RikQ9D6C3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
3830403N18RikQ9D6C3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
3830403N18RikQ9D6C3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
3830403N18RikQ9D6C3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
3830403N18RikQ9D6C3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
3830403N18RikQ9D6C3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
3830403N18RikQ9D6C3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
3830403N18RikQ9D6C3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
3830403N18RikQ9D6C3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
3830403N18RikQ9D6C3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms