Protein–RNA interactions for Protein: S4R2L0

Scgb2b12, ABPBG12, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b12S4R2L0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Scgb2b12S4R2L0 Gm25239-201ENSMUST00000174915 86 ntBASIC35.64■■■■□ 3.3
Scgb2b12S4R2L0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.16■■■■□ 3.22
Scgb2b12S4R2L0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Scgb2b12S4R2L0 Psd-208ENSMUST00000224556 2034 ntBASIC34.23■■■■□ 3.07
Scgb2b12S4R2L0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Scgb2b12S4R2L0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Scgb2b12S4R2L0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Scgb2b12S4R2L0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Scgb2b12S4R2L0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Scgb2b12S4R2L0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Scgb2b12S4R2L0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Scgb2b12S4R2L0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Scgb2b12S4R2L0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Scgb2b12S4R2L0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.27■■■□□ 2.76
Scgb2b12S4R2L0 Gm15042-201ENSMUST00000120212 883 ntBASIC32.17■■■□□ 2.74
Scgb2b12S4R2L0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Scgb2b12S4R2L0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Scgb2b12S4R2L0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Scgb2b12S4R2L0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Scgb2b12S4R2L0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Scgb2b12S4R2L0 Gm15045-201ENSMUST00000117359 883 ntBASIC31.72■■■□□ 2.67
Scgb2b12S4R2L0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scgb2b12S4R2L0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
Scgb2b12S4R2L0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Scgb2b12S4R2L0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scgb2b12S4R2L0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Scgb2b12S4R2L0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Scgb2b12S4R2L0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.26■■■□□ 2.6
Scgb2b12S4R2L0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Scgb2b12S4R2L0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.19■■■□□ 2.58
Scgb2b12S4R2L0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Scgb2b12S4R2L0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.12■■■□□ 2.57
Scgb2b12S4R2L0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Scgb2b12S4R2L0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Scgb2b12S4R2L0 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.8■■■□□ 2.52
Scgb2b12S4R2L0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Scgb2b12S4R2L0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Scgb2b12S4R2L0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Scgb2b12S4R2L0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.75■■■□□ 2.51
Scgb2b12S4R2L0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Scgb2b12S4R2L0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Scgb2b12S4R2L0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Scgb2b12S4R2L0 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.58■■■□□ 2.49
Scgb2b12S4R2L0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.55■■■□□ 2.48
Scgb2b12S4R2L0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Scgb2b12S4R2L0 Gm24109-201ENSMUST00000175489 103 ntBASIC30.47■■■□□ 2.47
Scgb2b12S4R2L0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Scgb2b12S4R2L0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Scgb2b12S4R2L0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Scgb2b12S4R2L0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scgb2b12S4R2L0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Scgb2b12S4R2L0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Scgb2b12S4R2L0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Scgb2b12S4R2L0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Scgb2b12S4R2L0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Scgb2b12S4R2L0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Scgb2b12S4R2L0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Scgb2b12S4R2L0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Scgb2b12S4R2L0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Scgb2b12S4R2L0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
Scgb2b12S4R2L0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Scgb2b12S4R2L0 Gm23366-201ENSMUST00000175022 89 ntBASIC29.87■■■□□ 2.37
Scgb2b12S4R2L0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.86■■■□□ 2.37
Scgb2b12S4R2L0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Scgb2b12S4R2L0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Scgb2b12S4R2L0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Scgb2b12S4R2L0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.71■■■□□ 2.35
Scgb2b12S4R2L0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Scgb2b12S4R2L0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Scgb2b12S4R2L0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Scgb2b12S4R2L0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.56■■■□□ 2.32
Scgb2b12S4R2L0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Scgb2b12S4R2L0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Scgb2b12S4R2L0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Scgb2b12S4R2L0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Scgb2b12S4R2L0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Scgb2b12S4R2L0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Scgb2b12S4R2L0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Scgb2b12S4R2L0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Scgb2b12S4R2L0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Scgb2b12S4R2L0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Scgb2b12S4R2L0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Scgb2b12S4R2L0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
Scgb2b12S4R2L0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.22■■■□□ 2.27
Scgb2b12S4R2L0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Scgb2b12S4R2L0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Scgb2b12S4R2L0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Scgb2b12S4R2L0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Scgb2b12S4R2L0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29■■■□□ 2.23
Scgb2b12S4R2L0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Scgb2b12S4R2L0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Scgb2b12S4R2L0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Scgb2b12S4R2L0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Scgb2b12S4R2L0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scgb2b12S4R2L0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scgb2b12S4R2L0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Scgb2b12S4R2L0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scgb2b12S4R2L0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Scgb2b12S4R2L0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms