RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W ADE1P27616 306 aa3.55□□□□□ -1.84
SWI1YPL016W SNC1P31109 117 aa3.55□□□□□ -1.84
SWI1YPL016W NTG1P31378 399 aa3.55□□□□□ -1.84
SWI1YPL016W GLC3P32775 704 aa3.55□□□□□ -1.84
SWI1YPL016W YHL041WP38730 149 aa3.55□□□□□ -1.84
SWI1YPL016W BFR1P38934 470 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84 RIP-Chip
SWI1YPL016W YTA6P40328 754 aa3.55□□□□□ -1.84
SWI1YPL016W GTS1P40956 396 aa3.55□□□□□ -1.84
SWI1YPL016W SSY5P47002 699 aa3.55□□□□□ -1.84
SWI1YPL016W PYK2P52489 506 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W UBC12P52491 188 aa3.55□□□□□ -1.84
SWI1YPL016W UFD1P53044 361 aa3.55□□□□□ -1.84
SWI1YPL016W BUD9P53226 547 aa3.55□□□□□ -1.84
SWI1YPL016W YNL033WP53964 284 aa3.55□□□□□ -1.84
SWI1YPL016W YNL019CP53975 284 aa3.55□□□□□ -1.84
SWI1YPL016W SEN54Q02825 467 aaPredicted RBP3.55□□□□□ -1.84
SWI1YPL016W JIP4Q03361 876 aa3.55□□□□□ -1.84
SWI1YPL016W RGT2Q12300 763 aa3.55□□□□□ -1.84
SWI1YPL016W RRP12Q12754 1228 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W YPK2P18961 677 aa3.55□□□□□ -1.84
SWI1YPL016W CDC12P32468 407 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W UTR2P32623 467 aa3.55□□□□□ -1.84
SWI1YPL016W YKL133CP36066 463 aa3.55□□□□□ -1.84
SWI1YPL016W MOH1P38191 138 aa3.55□□□□□ -1.84
SWI1YPL016W PHO89P38361 574 aa3.55□□□□□ -1.84
SWI1YPL016W GUA1P38625 525 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W ARN2P38724 620 aa3.55□□□□□ -1.84
SWI1YPL016W LYS20P48570 428 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W NCS6P53088 359 aa3.55□□□□□ -1.84
SWI1YPL016W YNL018CP53976 612 aa3.55□□□□□ -1.84
SWI1YPL016W PLB2Q03674 706 aa3.55□□□□□ -1.84
SWI1YPL016W YMR155WQ03795 547 aa3.55□□□□□ -1.84
SWI1YPL016W ISR1Q06098 443 aaKnown RBP3.55□□□□□ -1.84
SWI1YPL016W YLR345WQ06137 509 aa3.55□□□□□ -1.84
SWI1YPL016W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
SWI1YPL016W YDR061WQ12298 539 aa3.55□□□□□ -1.84
SWI1YPL016W RRI2Q12348 645 aa3.55□□□□□ -1.84
SWI1YPL016W ARP7Q12406 477 aa3.55□□□□□ -1.84
SWI1YPL016W AFI1Q99222 893 aa3.55□□□□□ -1.84
SWI1YPL016W ERD2P18414 219 aa3.54□□□□□ -1.84
SWI1YPL016W EMC1P25574 760 aa3.54□□□□□ -1.84
SWI1YPL016W BUB3P26449 341 aa3.54□□□□□ -1.84
SWI1YPL016W PEX4P29340 183 aa3.54□□□□□ -1.84
SWI1YPL016W HIS7P33734 552 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W PHO11P35842 467 aa3.54□□□□□ -1.84
SWI1YPL016W PHO12P38693 467 aa3.54□□□□□ -1.84
SWI1YPL016W BST1P43571 1029 aa3.54□□□□□ -1.84
SWI1YPL016W MDM34P53083 459 aa3.54□□□□□ -1.84
SWI1YPL016W DOT1Q04089 582 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W MRPL35Q06678 367 aa3.54□□□□□ -1.84
SWI1YPL016W YOR022CQ12204 715 aa3.54□□□□□ -1.84
SWI1YPL016W SFM1Q12314 213 aa3.54□□□□□ -1.84
SWI1YPL016W ADF1Q2V2Q1 113 aa3.54□□□□□ -1.84
SWI1YPL016W FLP1P03870 423 aa3.54□□□□□ -1.84
SWI1YPL016W TCP1P12612 559 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W YCL049CP25577 312 aa3.54□□□□□ -1.84
SWI1YPL016W FUN30P31380 1131 aa3.54□□□□□ -1.84
SWI1YPL016W MAL32P38158 584 aa3.54□□□□□ -1.84
SWI1YPL016W PNT1P38969 423 aa3.54□□□□□ -1.84
SWI1YPL016W NIT2P47016 307 aa3.54□□□□□ -1.84
SWI1YPL016W MAL12P53341 584 aa3.54□□□□□ -1.84
SWI1YPL016W RRN9P53437 365 aa3.54□□□□□ -1.84
SWI1YPL016W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SWI1YPL016W ECM9Q02202 377 aa3.54□□□□□ -1.84
SWI1YPL016W YPL245WQ12179 454 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W YOR114WQ12219 294 aa3.54□□□□□ -1.84
SWI1YPL016W URA7P28274 579 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W SHP1P34223 423 aa3.54□□□□□ -1.84
SWI1YPL016W OAR1P35731 278 aa3.54□□□□□ -1.84
SWI1YPL016W DUN1P39009 513 aa3.54□□□□□ -1.84
SWI1YPL016W YHC3P47040 408 aa3.54□□□□□ -1.84
SWI1YPL016W TAD2P47058 250 aa3.54□□□□□ -1.84
SWI1YPL016W DAN1P47178 298 aa3.54□□□□□ -1.84
SWI1YPL016W JAC1P53193 184 aa3.54□□□□□ -1.84
SWI1YPL016W BUD17P53727 317 aa3.54□□□□□ -1.84
SWI1YPL016W BRE5P53741 515 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W YPL108WQ02872 168 aaPredicted RBP3.54□□□□□ -1.84
SWI1YPL016W RKM2Q03942 479 aa3.54□□□□□ -1.84
SWI1YPL016W SMA2Q04658 369 aa3.54□□□□□ -1.84
SWI1YPL016W CRF1Q04930 467 aa3.54□□□□□ -1.84
SWI1YPL016W RTT103Q05543 409 aa3.54□□□□□ -1.84
SWI1YPL016W MSC3Q05812 728 aa3.54□□□□□ -1.84
SWI1YPL016W SPO77Q06134 477 aa3.54□□□□□ -1.84
SWI1YPL016W PKH2Q12236 1081 aaKnown RBP3.54□□□□□ -1.84
SWI1YPL016W TRM10Q12400 293 aa3.54□□□□□ -1.84
SWI1YPL016W ERR1P0CX10 437 aa3.53□□□□□ -1.84
SWI1YPL016W ERR2P0CX11 437 aa3.53□□□□□ -1.84
SWI1YPL016W MRS4P23500 304 aa3.53□□□□□ -1.84
SWI1YPL016W STE14P32584 239 aa3.53□□□□□ -1.84
SWI1YPL016W SKT5P34226 696 aa3.53□□□□□ -1.84
SWI1YPL016W AVT5P38176 459 aa3.53□□□□□ -1.84
SWI1YPL016W ERV15P38312 142 aa3.53□□□□□ -1.84
SWI1YPL016W PZF1P39933 429 aa3.53□□□□□ -1.84
SWI1YPL016W ERR3P42222 437 aa3.53□□□□□ -1.84
SWI1YPL016W SLS1P42900 643 aa3.53□□□□□ -1.84
SWI1YPL016W YGL185CP53100 379 aa3.53□□□□□ -1.84
SWI1YPL016W POP6P53218 158 aa3.53□□□□□ -1.84
SWI1YPL016W YNR062CP53748 327 aa3.53□□□□□ -1.84
SWI1YPL016W AIM36Q03798 255 aa3.53□□□□□ -1.84
SWI1YPL016W MSS11Q03825 758 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms