RNA–Protein interactions for RNA: YOR083W

WHI5, Transcript of Repressor of G1 transcription, yeast

Gene WHI5, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI5	YOR083W	MMP1	Q12372	583 aa		11.35	□□□□□ -0.59
WHI5	YOR083W	MCK1	P21965	375 aa	Known RBP	11.34	□□□□□ -0.59
WHI5	YOR083W	PAC1	P39946	494 aa	Known RBP	11.34	□□□□□ -0.59
WHI5	YOR083W	TPA1	P40032	644 aa	Known RBP	11.34	□□□□□ -0.59
WHI5	YOR083W	LAS21	P40367	830 aa		11.34	□□□□□ -0.59
WHI5	YOR083W	RLP7	P40693	322 aa	Known RBP	11.34	□□□□□ -0.59
WHI5	YOR083W	RNH70	P53331	553 aa		11.34	□□□□□ -0.59
WHI5	YOR083W	YDR476C	Q03362	224 aa		11.34	□□□□□ -0.59
WHI5	YOR083W	YDR209C	Q03480	137 aa		11.34	□□□□□ -0.59
WHI5	YOR083W	PRP46	Q12417	451 aa	Predicted RBP	11.34	□□□□□ -0.59
WHI5	YOR083W	ATG14	P38270	344 aa		11.33	□□□□□ -0.6
WHI5	YOR083W	UBX6	P47049	396 aa		11.33	□□□□□ -0.6
WHI5	YOR083W	ATG21	Q02887	496 aa		11.33	□□□□□ -0.6
WHI5	YOR083W	YPR109W	Q06104	294 aa		11.33	□□□□□ -0.6
WHI5	YOR083W	GGA1	Q06336	557 aa		11.33	□□□□□ -0.6
WHI5	YOR083W	MKK1	P32490	508 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	MCM7	P38132	845 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	RCK1	P38622	512 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	TRM5	P38793	499 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	MNN9	P39107	395 aa	Known RBP	11.32	□□□□□ -0.6
WHI5	YOR083W	QDR2	P40474	542 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	SEH1	P53011	349 aa	Known RBP	11.32	□□□□□ -0.6
WHI5	YOR083W	HOL1	P53389	586 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	SKI8	Q02793	397 aa	Predicted RBP	11.32	□□□□□ -0.6
WHI5	YOR083W	YOR342C	Q12182	319 aa		11.32	□□□□□ -0.6
WHI5	YOR083W	THP2	O13539	261 aa	Known RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	HTS1	P07263	546 aa	Known RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	ZWF1	P11412	505 aa	Known RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	GDT1	P38301	280 aa	Predicted RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	IRC6	P43615	237 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	AAD10	P47182	288 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	KEL2	P50090	882 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	MPA43	P53583	542 aa	Predicted RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	YLR460C	P54007	376 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	SRP1	Q02821	542 aa	Known RBP	11.31	□□□□□ -0.6
WHI5	YOR083W	MDM32	Q12171	622 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	YOR032W-A	Q8TGS1	66 aa		11.31	□□□□□ -0.6
WHI5	YOR083W	SAC7	P17121	654 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	NUD1	P32336	851 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	FAD1	P38913	306 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	DLD3	P39976	496 aa	Known RBP	11.3	□□□□□ -0.6
WHI5	YOR083W	CIN1	P40987	1014 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	MIG2	P53035	382 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	ATP25	Q03153	612 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	YIG1	Q08956	461 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	PSF1	Q12488	208 aa		11.3	□□□□□ -0.6
WHI5	YOR083W	PUT2	P07275	575 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	MER1	P16523	270 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	SAN1	P22470	610 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	CTR86	P25355	563 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	ATP7	P30902	174 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	NGG1	P32494	702 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	MTW1	P39731	289 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	YIL067C	P40514	678 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	YGR079W	P53249	370 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	GTB1	Q04924	702 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	MFG1	Q07684	458 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	MUM3	Q08750	479 aa		11.29	□□□□□ -0.6
WHI5	YOR083W	SNX3	Q08826	162 aa	Known RBP	11.29	□□□□□ -0.6
WHI5	YOR083W	HTA1	P04911	132 aa	Known RBP	11.28	□□□□□ -0.6
WHI5	YOR083W	RPP1B	P10622	106 aa	Known RBP	11.28	□□□□□ -0.6
WHI5	YOR083W	BAR1	P12630	587 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	DEP1	P31385	405 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	TUL1	P36096	758 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	FAA2	P39518	744 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	JEM1	P40358	645 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	SHR5	P41912	237 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	VNX1	P42839	908 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	BIT61	P47041	543 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	TMA22	P47089	198 aa	Predicted RBP	11.28	□□□□□ -0.6
WHI5	YOR083W	CGI121	Q03705	181 aa	Known RBP	11.28	□□□□□ -0.6
WHI5	YOR083W	YOS9	Q99220	542 aa		11.28	□□□□□ -0.6
WHI5	YOR083W	RNA1	P11745	407 aa	Known RBP	11.27	□□□□□ -0.61
WHI5	YOR083W	CLB3	P24870	427 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	MEF1	P25039	761 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	EMP70	P32802	667 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	YOR062C	P36025	268 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	ZTA1	P38230	334 aa	Known RBP	11.27	□□□□□ -0.61
WHI5	YOR083W	ANS1	P38832	159 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	EMC2	P47133	292 aa	Known RBP	11.27	□□□□□ -0.61
WHI5	YOR083W	YPL107W	Q02873	248 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	RAD30	Q04049	632 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	SPC24	Q04477	213 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	ARR1	Q06596	294 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	YDL218W	Q07629	317 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	PSR1	Q07800	427 aa		11.27	□□□□□ -0.61
WHI5	YOR083W	CBS1	P14066	229 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	RPS1B	P23248	255 aa	Known RBP	11.26	□□□□□ -0.61
WHI5	YOR083W	LHP1	P33399	275 aa	Known RBP	11.26	□□□□□ -0.61
WHI5	YOR083W	DHR2	P36009	735 aa	Predicted RBP	11.26	□□□□□ -0.61
WHI5	YOR083W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
WHI5	YOR083W	ATG4	P53867	494 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	SWP1	Q02795	286 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	FDC1	Q03034	503 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	NAT4	Q04751	285 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	ATG38	Q05789	226 aa	Known RBP	11.26	□□□□□ -0.61
WHI5	YOR083W	SEI1	Q06058	285 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	TAD3	Q9URQ3	322 aa		11.26	□□□□□ -0.61
WHI5	YOR083W	RPL43A	P0CX25	92 aa	Known RBP	11.25	□□□□□ -0.61
WHI5	YOR083W	RPL43B	P0CX26	92 aa		11.25	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms