RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W MSY1P48527 492 aa1.96□□□□□ -2.09
RTT107YHR154W ZPR1P53303 486 aaKnown RBP1.96□□□□□ -2.09
RTT107YHR154W MUK1Q02866 612 aa1.96□□□□□ -2.09
RTT107YHR154W YMR160WQ03823 816 aa1.96□□□□□ -2.09
RTT107YHR154W GFD1Q04839 188 aaKnown RBP1.96□□□□□ -2.09
RTT107YHR154W YOL159CQ08300 171 aa1.96□□□□□ -2.09
RTT107YHR154W YPQ1Q12010 308 aa1.96□□□□□ -2.09
RTT107YHR154W FMP16Q12497 93 aa1.96□□□□□ -2.09
RTT107YHR154W NFT1P0CE68 1218 aa1.96□□□□□ -2.1
RTT107YHR154W PRP6P19735 899 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W HXT2P23585 541 aa1.96□□□□□ -2.1
RTT107YHR154W CYS4P32582 507 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W PRS1P32895 427 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W RPC37P36121 282 aa1.96□□□□□ -2.1
RTT107YHR154W MBB1P39534 108 aa1.96□□□□□ -2.1
RTT107YHR154W YER079WP40052 210 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W SDS3P40505 327 aa1.96□□□□□ -2.1
RTT107YHR154W ATG27P46989 271 aa1.96□□□□□ -2.1
RTT107YHR154W BRO1P48582 844 aa1.96□□□□□ -2.1
RTT107YHR154W RIB4P50861 169 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W MRK1P50873 501 aa1.96□□□□□ -2.1
RTT107YHR154W ERG26P53199 349 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W DBP6P53734 629 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W SLU7Q02775 382 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W GIP3Q03016 1276 aa1.96□□□□□ -2.1
RTT107YHR154W SMP3Q04174 516 aa1.96□□□□□ -2.1
RTT107YHR154W TMA10Q06177 86 aa1.96□□□□□ -2.1
RTT107YHR154W IPK1Q06667 281 aa1.96□□□□□ -2.1
RTT107YHR154W CYK3Q07533 885 aa1.96□□□□□ -2.1
RTT107YHR154W NDJ1Q12366 352 aa1.96□□□□□ -2.1
RTT107YHR154W RPS19AP07280 144 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W RPS19BP07281 144 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W THR4P16120 514 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W RNR3P21672 869 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W YSP3P25036 478 aa1.96□□□□□ -2.1
RTT107YHR154W PTP1P25044 335 aa1.96□□□□□ -2.1
RTT107YHR154W ATP11P32453 318 aa1.96□□□□□ -2.1
RTT107YHR154W ERG1P32476 496 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W SKG6P32900 734 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W GMH1P36125 273 aa1.96□□□□□ -2.1
RTT107YHR154W VBA2P38358 474 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W YHR210CP38893 341 aa1.96□□□□□ -2.1
RTT107YHR154W RCY1P39531 840 aa1.96□□□□□ -2.1
RTT107YHR154W YHB1P39676 399 aaKnown RBP1.96□□□□□ -2.1
RTT107YHR154W GCD14P46959 383 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W TAX4P47030 604 aa1.96□□□□□ -2.1
RTT107YHR154W PHB2P50085 310 aa1.96□□□□□ -2.1
RTT107YHR154W STP1Q00947 519 aa1.96□□□□□ -2.1
RTT107YHR154W SNZ1Q03148 297 aa1.96□□□□□ -2.1
RTT107YHR154W BNA7Q04066 261 aa1.96□□□□□ -2.1
RTT107YHR154W TMN2Q04562 672 aa1.96□□□□□ -2.1
RTT107YHR154W DCP1Q12517 231 aaPredicted RBP1.96□□□□□ -2.1
RTT107YHR154W RPS3P05750 240 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W MRP2P10663 115 aaPredicted RBP1.95□□□□□ -2.1
RTT107YHR154W YSC83P32792 385 aa1.95□□□□□ -2.1
RTT107YHR154W SOR1P35497 357 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W QDR3P38227 689 aa1.95□□□□□ -2.1
RTT107YHR154W GPI16P38875 610 aa1.95□□□□□ -2.1
RTT107YHR154W FET3P38993 636 aa1.95□□□□□ -2.1
RTT107YHR154W VRG4P40107 337 aa1.95□□□□□ -2.1
RTT107YHR154W SHQ1P40486 507 aaPredicted RBP1.95□□□□□ -2.1
RTT107YHR154W YIR016WP40572 265 aa1.95□□□□□ -2.1
RTT107YHR154W EFM3P47163 339 aa1.95□□□□□ -2.1
RTT107YHR154W UBC11P52492 156 aa1.95□□□□□ -2.1
RTT107YHR154W YGR168CP53293 376 aa1.95□□□□□ -2.1
RTT107YHR154W RTT102P53330 157 aa1.95□□□□□ -2.1
RTT107YHR154W SMM1P53720 384 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W YMR102CQ03177 834 aa1.95□□□□□ -2.1
RTT107YHR154W RRP17Q04031 235 aaPredicted RBP1.95□□□□□ -2.1
RTT107YHR154W RRG8Q06109 277 aa1.95□□□□□ -2.1
RTT107YHR154W SOR2Q07786 357 aa1.95□□□□□ -2.1
RTT107YHR154W REX4Q08237 289 aa1.95□□□□□ -2.1
RTT107YHR154W RDR1Q08904 546 aa1.95□□□□□ -2.1
RTT107YHR154W RKM1Q08961 583 aaPredicted RBP1.95□□□□□ -2.1
RTT107YHR154W RGS2Q99188 309 aa1.95□□□□□ -2.1
RTT107YHR154W OPI3P05375 206 aa1.95□□□□□ -2.1
RTT107YHR154W RPL18AP0CX49 186 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W RPL18BP0CX50 186 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W ELO2P25358 347 aa1.95□□□□□ -2.1
RTT107YHR154W PSO2P30620 661 aa1.95□□□□□ -2.1
RTT107YHR154W ECT1P33412 323 aa1.95□□□□□ -2.1
RTT107YHR154W HMT1P38074 348 aa1.95□□□□□ -2.1
RTT107YHR154W TSC10P38342 320 aa1.95□□□□□ -2.1
RTT107YHR154W FHL1P39521 936 aa1.95□□□□□ -2.1
RTT107YHR154W ATM1P40416 690 aa1.95□□□□□ -2.1
RTT107YHR154W CHA4P43634 648 aa1.95□□□□□ -2.1
RTT107YHR154W DRN1P53255 507 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W DSL1P53847 754 aa1.95□□□□□ -2.1
RTT107YHR154W SPO19Q03029 223 aa1.95□□□□□ -2.1
RTT107YHR154W SEG1Q04279 960 aa1.95□□□□□ -2.1
RTT107YHR154W ATG9Q12142 997 aa1.95□□□□□ -2.1
RTT107YHR154W MES1P00958 751 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W GPH1P06738 902 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W ATP10P18496 279 aa1.95□□□□□ -2.1
RTT107YHR154W APE2P32454 952 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W RPC25P35718 212 aa1.95□□□□□ -2.1
RTT107YHR154W SNU114P36048 1008 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W ASC1P38011 319 aaKnown RBP1.95□□□□□ -2.1
RTT107YHR154W BNA4P38169 460 aa1.95□□□□□ -2.1
RTT107YHR154W OSH3P38713 996 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms