RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	ARG7	Q04728	441 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	FMP42	Q04991	504 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	OPI10	Q08202	246 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	NTG2	Q08214	380 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	DAP1	Q12091	152 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	NMD4	Q12129	218 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	MSH5	Q12175	901 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	YPL119C-A	Q3E751	87 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	RIB3	Q99258	208 aa		4.48	□□□□□ -1.69
SUP35	YDR172W	GPH1	P06738	902 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	YKR104W	P0CE69	306 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	CLB2	P24869	491 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	CLB3	P24870	427 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	RAD51	P25454	400 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	ITR2	P30606	609 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	NUP2	P32499	720 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	NPL6	P32832	435 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	LHP1	P33399	275 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	YBR139W	P38109	508 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	SEA4	P38164	1038 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	TSL1	P38427	1098 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	YHR033W	P38690	423 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	GIC1	P38785	314 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	PEX7	P39108	375 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	NDE1	P40215	560 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	IRC5	P43610	853 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	SLD3	P53135	668 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	YGR054W	P53235	642 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	CSL4	P53859	292 aa	Predicted RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	IGO1	P53897	168 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	MSC1	Q03104	513 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	DBP9	Q06218	594 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	GRS2	Q06817	618 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	COS7	Q07788	383 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	HRP1	Q99383	534 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	STT4	P37297	1900 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	SLM5	P25345	492 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	RER1	P25560	188 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	PUP2	P32379	260 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	PRP21	P32524	280 aa	Predicted RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	VPS21	P36017	210 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	TPO5	P36029	618 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	NTR2	P36118	322 aa	Predicted RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	GGC1	P38988	300 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	SOP4	P39543	234 aa	Predicted RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	AIM20	P40451	204 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	SSU1	P41930	458 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	MET12	P46151	657 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	YJL043W	P47053	257 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	BIR1	P47134	954 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	FAA4	P47912	694 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	COS12	P53053	380 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	PRM8	P53174	237 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	GOR1	P53839	350 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	TDA7	P53882	636 aa	Predicted RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	RRN5	Q02983	363 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	CTK1	Q03957	528 aa	Known RBP	4.47	□□□□□ -1.69
SUP35	YDR172W	EAF1	Q06337	982 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	ATG29	Q12092	213 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	GLE1	Q12315	538 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	MHF1	Q3E835	90 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	MED11	Q99278	115 aa		4.47	□□□□□ -1.69
SUP35	YDR172W	PUT2	P07275	575 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	SPT15	P13393	240 aa	Known RBP	4.46	□□□□□ -1.7
SUP35	YDR172W	VMA6	P32366	345 aa	Known RBP	4.46	□□□□□ -1.7
SUP35	YDR172W	OMA1	P36163	345 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	STP2	P38704	541 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	MET30	P39014	640 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	CCT6	P39079	546 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	SOK1	P40317	901 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	EFM3	P47163	339 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	COQ5	P49017	307 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	RIP-Chip
SUP35	YDR172W	SMA1	Q02651	245 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	GPI17	Q04080	534 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	ENT2	Q05785	613 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	FMP45	Q07651	309 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	YOR389W	Q08912	624 aa		4.46	□□□□□ -1.7
SUP35	YDR172W	BRR1	Q99177	341 aa	Predicted RBP	4.46	□□□□□ -1.7
SUP35	YDR172W	RPC40	P07703	335 aa	Known RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	KIN2	P13186	1147 aa	Known RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	ENA1	P13587	1091 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	SAM35	P14693	329 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	MER1	P16523	270 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
SUP35	YDR172W	RIB7	P33312	244 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	KKQ8	P36004	724 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	YKL151C	P36059	337 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	IPT1	P38954	527 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	PCF11	P39081	626 aa	Predicted RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	VRG4	P40107	337 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	RBL2	P48606	106 aa	Known RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	ERG26	P53199	349 aa	Known RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	PXR1	P53335	271 aa	Predicted RBP	4.45	□□□□□ -1.7
SUP35	YDR172W	SNO2	P53823	222 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	ASI1	P54074	624 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	ENA2	Q01896	1091 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	SPO77	Q06134	477 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	YLR036C	Q07986	203 aa		4.45	□□□□□ -1.7
SUP35	YDR172W	YPL191C	Q08930	360 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms