RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeastyeast

Gene PHO88, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO88YBR106W NDE2Q07500 545 aa3.29□□□□□ -1.88
PHO88YBR106W CLP1Q08685 445 aaPredicted RBP3.29□□□□□ -1.88
PHO88YBR106W PKH2Q12236 1081 aaKnown RBP3.29□□□□□ -1.88
PHO88YBR106W PSY3Q12318 242 aa3.29□□□□□ -1.88
PHO88YBR106W DST1P07273 309 aa3.28□□□□□ -1.88
PHO88YBR106W ARF1P11076 181 aaKnown RBP3.28□□□□□ -1.88
PHO88YBR106W MTF1P14908 341 aaKnown RBP3.28□□□□□ -1.88
PHO88YBR106W LSB5P25369 354 aa3.28□□□□□ -1.88
PHO88YBR106W DOA1P36037 715 aa3.28□□□□□ -1.88
PHO88YBR106W PCA1P38360 1216 aa3.28□□□□□ -1.88
PHO88YBR106W BZZ1P38822 633 aa3.28□□□□□ -1.88
PHO88YBR106W RTT105P40063 208 aa3.28□□□□□ -1.88
PHO88YBR106W GUF1P46943 645 aa3.28□□□□□ -1.88
PHO88YBR106W EFM3P47163 339 aa3.28□□□□□ -1.88
PHO88YBR106W RAD17P48581 401 aa3.28□□□□□ -1.88
PHO88YBR106W YNR048WP53740 393 aa3.28□□□□□ -1.88
PHO88YBR106W PDR16P53860 351 aaKnown RBP3.28□□□□□ -1.88
PHO88YBR106W MRP51Q02950 344 aa3.28□□□□□ -1.88
PHO88YBR106W BET5Q03630 159 aa3.28□□□□□ -1.88
PHO88YBR106W RBA50Q04418 439 aa3.28□□□□□ -1.88
PHO88YBR106W FMP42Q04991 504 aa3.28□□□□□ -1.88
PHO88YBR106W DSE3Q08729 430 aa3.28□□□□□ -1.88
PHO88YBR106W TIM18Q08749 192 aa3.28□□□□□ -1.88
PHO88YBR106W RRD2Q12461 358 aa3.28□□□□□ -1.88
PHO88YBR106W NUP188P52593 1655 aaKnown RBP3.27□□□□□ -1.89
PHO88YBR106W TEF1P02994 458 aaKnown RBP3.27□□□□□ -1.89
PHO88YBR106W SAM1P10659 382 aaKnown RBP3.27□□□□□ -1.89
PHO88YBR106W ATR1P13090 542 aa3.27□□□□□ -1.89
PHO88YBR106W PRP16P15938 1071 aaPredicted RBP3.27□□□□□ -1.89
PHO88YBR106W DAP2P18962 818 aa3.27□□□□□ -1.89
PHO88YBR106W SPS22P25380 463 aa3.27□□□□□ -1.89
PHO88YBR106W FRE1P32791 686 aa3.27□□□□□ -1.89
PHO88YBR106W SIP2P34164 415 aaKnown RBP3.27□□□□□ -1.89
PHO88YBR106W YBR056WP38081 501 aa3.27□□□□□ -1.89
PHO88YBR106W YBP1P38315 674 aa3.27□□□□□ -1.89
PHO88YBR106W YDR089WP38966 869 aa3.27□□□□□ -1.89
PHO88YBR106W PCL7P40186 285 aa3.27□□□□□ -1.89
PHO88YBR106W AZF1P41696 914 aa3.27□□□□□ -1.89
PHO88YBR106W LAM5P43560 674 aa3.27□□□□□ -1.89
PHO88YBR106W ROG1P53118 685 aa3.27□□□□□ -1.89
PHO88YBR106W YNL143CP53908 130 aa3.27□□□□□ -1.89
PHO88YBR106W GPI15P53961 229 aa3.27□□□□□ -1.89
PHO88YBR106W RPM2Q02773 1202 aa3.27□□□□□ -1.89
PHO88YBR106W STD1Q02794 444 aa3.27□□□□□ -1.89
PHO88YBR106W APC2Q12440 853 aa3.27□□□□□ -1.89
PHO88YBR106W TAD3Q9URQ3 322 aa3.27□□□□□ -1.89
PHO88YBR106W YBT1P32386 1661 aa3.27□□□□□ -1.89
PHO88YBR106W CHS1P08004 1131 aa3.26□□□□□ -1.89
PHO88YBR106W NFT1P0CE68 1218 aa3.26□□□□□ -1.89
PHO88YBR106W SLM5P25345 492 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W YCP4P25349 247 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W TIP1P27654 210 aaPredicted RBP3.26□□□□□ -1.89
PHO88YBR106W HMX1P32339 317 aa3.26□□□□□ -1.89
PHO88YBR106W EFB1P32471 206 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W SSE1P32589 693 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W COX13P32799 129 aa3.26□□□□□ -1.89
PHO88YBR106W PEX2P32800 271 aa3.26□□□□□ -1.89
PHO88YBR106W PTR2P32901 601 aa3.26□□□□□ -1.89
PHO88YBR106W YCR041WP37265 110 aa3.26□□□□□ -1.89
PHO88YBR106W ADH5P38113 351 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W QDR3P38227 689 aa3.26□□□□□ -1.89
PHO88YBR106W KEL1P38853 1164 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W MNL1P38888 796 aa3.26□□□□□ -1.89
PHO88YBR106W SHO1P40073 367 aa3.26□□□□□ -1.89
PHO88YBR106W MMF1P40185 145 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W ALG8P40351 577 aa3.26□□□□□ -1.89
PHO88YBR106W NAS2P40555 220 aa3.26□□□□□ -1.89
PHO88YBR106W GWT1P47026 490 aa3.26□□□□□ -1.89
PHO88YBR106W IKS1P47042 667 aa3.26□□□□□ -1.89
PHO88YBR106W SHE4P51534 789 aa3.26□□□□□ -1.89
PHO88YBR106W YIP5P53108 310 aa3.26□□□□□ -1.89
PHO88YBR106W SCW4P53334 386 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W FRE4P53746 719 aa3.26□□□□□ -1.89
PHO88YBR106W CAF40P53829 373 aa3.26□□□□□ -1.89
PHO88YBR106W YMR181CQ03231 154 aa3.26□□□□□ -1.89
PHO88YBR106W NUP53Q03790 475 aa3.26□□□□□ -1.89
PHO88YBR106W YMR111CQ04461 462 aaPredicted RBP3.26□□□□□ -1.89
PHO88YBR106W SPH1Q06160 661 aa3.26□□□□□ -1.89
PHO88YBR106W BSC1Q12140 328 aa3.26□□□□□ -1.89
PHO88YBR106W TPT1Q12272 230 aaKnown RBP3.26□□□□□ -1.89
PHO88YBR106W ORT1Q12375 292 aa3.26□□□□□ -1.89
PHO88YBR106W HAP1P0CE41 1502 aa3.25□□□□□ -1.89
PHO88YBR106W COX3P00420 269 aa3.25□□□□□ -1.89
PHO88YBR106W ATP1P07251 545 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W RPL42AP0CX27 106 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W RPL42BP0CX28 106 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W RNA1P11745 407 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W MER1P16523 270 aa3.25□□□□□ -1.89
PHO88YBR106W PET123P17558 318 aa3.25□□□□□ -1.89
PHO88YBR106W GLN3P18494 730 aa3.25□□□□□ -1.89
PHO88YBR106W MRPL8P22353 238 aa3.25□□□□□ -1.89
PHO88YBR106W PET18P25362 215 aa3.25□□□□□ -1.89
PHO88YBR106W RME1P32338 300 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W ATO2P32907 282 aa3.25□□□□□ -1.89
PHO88YBR106W RTT107P38850 1070 aa3.25□□□□□ -1.89
PHO88YBR106W AGX1P43567 385 aa3.25□□□□□ -1.89
PHO88YBR106W IBD2P53892 351 aa3.25□□□□□ -1.89
PHO88YBR106W RLI1Q03195 608 aaKnown RBP3.25□□□□□ -1.89
PHO88YBR106W YMR310CQ04867 317 aaPredicted RBP3.25□□□□□ -1.89
PHO88YBR106W ERP1Q05359 219 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms