RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 RUFY4Q6ZNE9 571 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 RASGRP4Q8TDF6 673 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 CASP10Q92851 521 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 FTHL17Q9BXU8 183 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 ENTPD7Q9NQZ7 604 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 PXMP2Q9NR77 195 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 ZNF215Q9UL58 517 aaPredicted RBP12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 ABCB11O95342 1321 aa12.85□□□□□ -0.35
PTP4A1-207ENST00000639568 HMMRO75330 724 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 TGFB3P10600 412 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 IBSPP21815 317 aaPredicted RBP12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 KCNC3Q14003 757 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 TCF25Q9BQ70 676 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 ERVK-5Q9HDB9 667 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 TOMM22Q9NS69 142 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 NCDNQ9UBB6 729 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 CDH22Q9UJ99 828 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 NRCAMQ92823 1304 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
PTP4A1-207ENST00000639568 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 M0R2C6 588 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 PDHBP11177 359 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 SCG2P13521 617 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 UBA1P22314 1058 aaKnown RBP12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 ARHGAP8P85298 464 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 ZNF543Q08ER8 600 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 TDGQ13569 410 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 ATAT1Q5SQI0 421 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 COL26A1Q96A83 441 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 CYP26B1Q9NR63 512 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 USP24Q9UPU5 2620 aa12.83□□□□□ -0.36
PTP4A1-207ENST00000639568 MAP1BP46821 2468 aaKnown RBP12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 DCDC2BA2VCK2 349 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 FSCN2O14926 492 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 KINO60870 393 aaKnown RBP12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 CFBP00751 764 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 CD52P31358 61 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 NOVP48745 357 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 GATMP50440 423 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 SP2Q02086 613 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 DMWDQ09019 674 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 ACSF2Q96CM8 615 aaPredicted RBP12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
PTP4A1-207ENST00000639568 TBKBP1A7MCY6 615 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 ADRB1P08588 477 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 WEE2P0C1S8 567 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 SP9P0CG40 484 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 ARP10275 920 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 ADAM17P78536 824 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 LMNB2Q03252 620 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 MGAT3Q09327 533 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 TBC1D8BQ0IIM8 1120 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 SPECC1Q5M775 1068 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 UTP14CQ5TAP6 766 aaKnown RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 TMC7Q7Z402 723 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 RTN4RL1Q86UN2 441 aaPredicted RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 CDY2AQ9Y6F7 541 aa12.81□□□□□ -0.36
PTP4A1-207ENST00000639568 HIDE1A8MVS5 230 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 M0QZ92 97 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 EOMESO95936 686 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 GOLGA8HP0CJ92 632 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 KRT17Q04695 432 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 RRP12Q5JTH9 1297 aaKnown RBP12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 VARS2Q5ST30 1063 aaKnown RBP12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 RARS2Q5T160 578 aaKnown RBP12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 IER5Q5VY09 327 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 XRRA1Q6P2D8 792 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 COLGALT1Q8NBJ5 622 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 TMEM87AQ8NBN3 555 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 DNAJB3Q8WWF6 145 aa12.8□□□□□ -0.36
PTP4A1-207ENST00000639568 PDCD2LQ9BRP1 358 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms