RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TBCAO75347 108 aaKnown RBP21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 RSPH10BP0C881 870 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 KCNMA1Q12791 1236 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 TBC1D10BQ4KMP7 808 aaPredicted RBP21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 FBXO38Q6PIJ6 1188 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 PIGOQ8TEQ8 1089 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 FAM184BQ9ULE4 1060 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 GJA3Q9Y6H8 435 aa21.77■■□□□ 1.08
PCDHB11-202ENST00000624887 IPO5O00410 1097 aaKnown RBP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 BCRP11274 1271 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 GAP43P17677 238 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 HOXD13P35453 343 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 EPHA7Q15375 998 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 NEK11Q8NG66 645 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 RIT2Q99578 217 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 TEKT3Q9BXF9 490 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 UNC45AQ9H3U1 944 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 OLFML3Q9NRN5 406 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 COL20A1Q9P218 1284 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 CDC23Q9UJX2 597 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 PDXKO00764 312 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 IPO7O95373 1038 aaKnown RBP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 MYBP10242 640 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 H2AFXP16104 143 aaPredicted RBP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 NR2F2P24468 414 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 C1orf186Q6ZWK4 172 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 CCDC155Q8N6L0 562 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 BAP1Q92560 729 aa21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 ZFP91Q96JP5 570 aaPredicted RBP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 NAPGQ99747 312 aaPredicted RBP21.76■■□□□ 1.07
PCDHB11-202ENST00000624887 ITGB5P18084 799 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 NIPA1Q7RTP0 329 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 SMCR8Q8TEV9 937 aaPredicted RBP21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 NACC1Q96RE7 527 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 MAP3K20Q9NYL2 800 aaKnown RBP21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 TRIM10Q9UDY6 481 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 PPP1R9AQ9ULJ8 1098 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 GUCA1BQ9UMX6 200 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 ZNF541Q9H0D2 1346 aa21.75■■□□□ 1.07
PCDHB11-202ENST00000624887 CALUO43852 315 aaPredicted RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 VCAM1P19320 739 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 DGKZQ13574 1117 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 CCDC122Q5T0U0 273 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 NBPF12Q5TAG4 269 aaPredicted RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 KIAA1328Q86T90 577 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 CPXCR1Q8N123 301 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 SAMD3Q8N6K7 520 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 CCDC42Q96M95 316 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 ARID3AQ99856 593 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 FLOT1O75955 427 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 PRPF6O94906 941 aaKnown RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 ALAS1P13196 640 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 LMNB1P20700 586 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 MTMR2Q13614 643 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 RSRC2Q7L4I2 434 aaKnown RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 RRAGAQ7L523 313 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 RAVER2Q9HCJ3 691 aaKnown RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 TYW1Q9NV66 732 aaKnown RBP21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 KCND2Q9NZV8 630 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 ARHGAP20Q9P2F6 1191 aa21.74■■□□□ 1.07
PCDHB11-202ENST00000624887 DOCK1Q14185 1865 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 LRRC53A6NM62 1247 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 KRT86O43790 486 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 USP14P54578 494 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 FRMPD4Q14CM0 1322 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 DCAF15Q66K64 600 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 FRMD5Q7Z6J6 570 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 NEK9Q8TD19 979 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 JAKMIP2Q96AA8 810 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 WRAP73Q9P2S5 460 aaPredicted RBP21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 PNMA2Q9UL42 364 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 LOXHD1Q8IVV2 1947 aa21.73■■□□□ 1.07
PCDHB11-202ENST00000624887 ZBTB39O15060 712 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 GCNT3O95395 438 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 PLEKP08567 350 aaPredicted RBP21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 PCNX4Q63HM2 1172 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 PDXDC1Q6P996 788 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 CACNA2D4Q7Z3S7 1137 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 IL31RAQ8NI17 732 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 SYT17Q9BSW7 474 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 BCAS3Q9H6U6 928 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 KCNH7Q9NS40 1196 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 CEP72Q9P209 647 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 ASTN1O14525 1302 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 EIF3DO15371 548 aaKnown RBP eCLIP21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 NOL4O94818 638 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 FAM13AO94988 1023 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 MUM1L1Q5H9M0 696 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 SRGAP1Q7Z6B7 1085 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 CEP112Q8N8E3 955 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 EHBP1Q8NDI1 1231 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 SYTL5Q8TDW5 730 aaPredicted RBP21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 NUCKS1Q9H1E3 243 aaKnown RBP21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 RPAP3Q9H6T3 665 aaPredicted RBP21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 SEL1LQ9UBV2 794 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 ZNF112Q9UJU3 913 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 UBIAD1Q9Y5Z9 338 aa21.72■■□□□ 1.07
PCDHB11-202ENST00000624887 RCCD1A6NED2 376 aa21.71■■□□□ 1.07
PCDHB11-202ENST00000624887 ZNF263O14978 683 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms