RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	VCPKMT	Q9H867	229 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	KLC4	Q9NSK0	619 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	KIAA1551	Q9HCM1	1747 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	PNMA6F	A0A0J9YX94	578 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	ZNF233	A6NK53	670 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	NOL4	O94818	638 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	SEC24C	P53992	1094 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	CACNB3	P54284	484 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	PSMD2	Q13200	908 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	NEDD9	Q14511	834 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	PRR16	Q569H4	304 aa		15.85	■□□□□ 0.13
SMTN-223	ENST00000619644	LAMB1	P07942	1786 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	EDIL3	O43854	480 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	PPP1R37	O75864	691 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	TTLL1	O95922	423 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	TAL1	P17542	331 aa	Predicted RBP	15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	HDLBP	Q00341	1268 aa	Known RBP	15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	PAK2	Q13177	524 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	PTGIS	Q16647	500 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	CCDC13	Q8IYE1	715 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	DAGLA	Q9Y4D2	1042 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	SSU72P8	A0A1W2PR75	194 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	CLGN	O14967	610 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	CLIC2	O15247	247 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	PRLR	P16471	622 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	NR1D1	P20393	614 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	TNFRSF8	P28908	595 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	ACTN3	Q08043	901 aa	Predicted RBP	15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	RPS6KA1	Q15418	735 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	DDX42	Q86XP3	938 aa	Known RBP eCLIP	15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	SEPT11	Q9NVA2	429 aa	Known RBP	15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	USP40	Q9NVE5	1235 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	PCDHA1	Q9Y5I3	950 aa		15.84	■□□□□ 0.13
SMTN-223	ENST00000619644	SFI1	A8K8P3	1242 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	C21orf2	O43822	256 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	IFT88	Q13099	833 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	DOK7	Q18PE1	504 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	CEP85L	Q5SZL2	805 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	MYCBPAP	Q8TBZ2	947 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	POLL	Q9UGP5	575 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	SERPINB13	Q9UIV8	391 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	MCM8	Q9UJA3	840 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	PCDHB13	Q9Y5F0	798 aa		15.83	■□□□□ 0.13
SMTN-223	ENST00000619644	MYH1	P12882	1939 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	ESYT2	A0FGR8	921 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	RBM5	P52756	815 aa	Known RBP eCLIP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	SMTN	P53814	917 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	PRPF4B	Q13523	1007 aa	Known RBP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	SLC18A3	Q16572	532 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	ODF2	Q5BJF6	829 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	NLRP14	Q86W24	1093 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	RNF10	Q8N5U6	811 aa	Known RBP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	SCFD1	Q8WVM8	642 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	CCT8L2	Q96SF2	557 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	TACO1	Q9BSH4	297 aa	Known RBP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	TRIM31	Q9BZY9	425 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	NT5C3A	Q9H0P0	336 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	DDX4	Q9NQI0	724 aa	Known RBP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	HDAC9	Q9UKV0	1011 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	SRCAP	Q6ZRS2	3230 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	ELF1	P32519	619 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	CASP5	P51878	434 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	PTK2	Q05397	1052 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	ZNF543	Q08ER8	600 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	ADAT2	Q7Z6V5	191 aa	Known RBP	15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	IQCK	Q8N0W5	287 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	PROM2	Q8N271	834 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	OR2W6P	Q8NHA6	318 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	CASKIN2	Q8WXE0	1202 aa		15.83	■□□□□ 0.12
SMTN-223	ENST00000619644	GOLGA6L10	A6NI86	522 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	RAD51C	O43502	376 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	RASSF9	O75901	435 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	IBSP	P21815	317 aa	Predicted RBP	15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	SHROOM1	Q2M3G4	852 aa	Predicted RBP	15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	ASTE1	Q2TB18	679 aa	Predicted RBP	15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	PREPL	Q4J6C6	727 aa	Predicted RBP	15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	TMEM119	Q4V9L6	283 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	PRR5L	Q6MZQ0	368 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	SLC30A10	Q6XR72	485 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	ARMCX3	Q9UH62	379 aa	Predicted RBP	15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	TSKS	Q9UJT2	592 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	PJA2	O43164	708 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	LCA5L	O95447	670 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	SCP2	P22307	547 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	PSMC6	P62333	389 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	NAB2	Q15742	525 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	FAM212A	Q96EL1	285 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	SLC40A1	Q9NP59	571 aa		15.82	■□□□□ 0.12
SMTN-223	ENST00000619644	IRS2	Q9Y4H2	1338 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	MED24	O75448	989 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	ATP2B4	P23634	1241 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	TNNC1	P63316	161 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	GJB7	Q6PEY0	223 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	N4BP2L2	Q92802	583 aa	Predicted RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	NUCKS1	Q9H1E3	243 aa	Known RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	BCAS3	Q9H6U6	928 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	ZBTB5	O15062	677 aa		15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	MDH1	P40925	334 aa	Known RBP	15.81	■□□□□ 0.12
SMTN-223	ENST00000619644	SF3A3	Q12874	501 aa	Known RBP eCLIP	15.81	■□□□□ 0.12	2e-6	■■■■□ 21.8
SMTN-223	ENST00000619644	DDX47	Q9H0S4	455 aa	Known RBP	15.81	■□□□□ 0.12

Retrieved 100 of 20,778 RNA–protein pairs in 67 ms