RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TUBE1Q9UJT0 475 aa20.08■□□□□ 0.81
SHKBP1-203ENST00000594298 GRXCR2A6NFK2 248 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 RPLP2P05387 115 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 GHRP10912 638 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 LPIN1Q14693 890 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 GRIK4Q16099 956 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 MARCH8Q5T0T0 291 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 FIBCD1Q8N539 461 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 PABPC5Q96DU9 382 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 NSUN3Q9H649 340 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 RC3H2Q9HBD1 1191 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 C11orf16Q9NQ32 467 aa20.07■□□□□ 0.8
SHKBP1-203ENST00000594298 SPDYE3A6NKU9 549 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 RB1P06400 928 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 LINC00271P0C7V0 271 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 IL9P15248 144 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 RXRAP19793 462 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 UBE2SQ16763 222 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 TCEAL5Q5H9L2 206 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 TMTC3Q6ZXV5 915 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 TEX2Q8IWB9 1127 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 GJD3Q8N144 294 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 FANCBQ8NB91 859 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 GLG1Q92896 1179 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 PCDHA6Q9UN73 950 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 HCN4Q9Y3Q4 1203 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 RWDD3Q9Y3V2 267 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 PCDHA8Q9Y5H6 950 aa20.06■□□□□ 0.8
SHKBP1-203ENST00000594298 ENPP3O14638 875 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 MARK3P27448 753 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 FBXO47Q5MNV8 452 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 TSHZ1Q6ZSZ6 1077 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 DNAJB3Q8WWF6 145 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 CLP1Q92989 425 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 TCEANC2Q96MN5 208 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 TM6SF1Q9BZW5 370 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 LMAN2LQ9H0V9 348 aa20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 RBM28Q9NW13 759 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-203ENST00000594298 ADGRA3Q8IWK6 1321 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 RRN3P2A6NIE6 340 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 ZBTB43O43298 467 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 NCK2O43639 380 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 BMPR1AP36894 532 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 RCAN1P53805 252 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 Q6ZUG5 572 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 FBXL16Q8N461 479 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 C11orf84Q9BUA3 381 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 JPH1Q9HDC5 661 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 CYP46A1Q9Y6A2 500 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 CDY2AQ9Y6F7 541 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 SQORQ9Y6N5 450 aa20.04■□□□□ 0.8
SHKBP1-203ENST00000594298 DOCK5Q9H7D0 1870 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 hCG_1642624A0A1W2PR95 340 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 H3BQ06 376 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 CTNNB1P35222 781 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 HEATR3Q7Z4Q2 680 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 MICU3Q86XE3 530 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 CCDC82Q8N4S0 544 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 TNPO1Q92973 898 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 PCYT2Q99447 389 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 ZSWIM6Q9HCJ5 1215 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 PKD2L1Q9P0L9 805 aa20.03■□□□□ 0.8
SHKBP1-203ENST00000594298 KLF18A0A0U1RQI7 1052 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 DGKIO75912 1065 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 INSRRP14616 1297 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 ANAPC15P60006 121 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 MRPS6P82932 125 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 IER5Q5VY09 327 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 RAB11FIP4Q86YS3 637 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 MXRA8Q9BRK3 442 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 AZI2Q9H6S1 392 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 KCNH7Q9NS40 1196 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 SLC9A2Q9UBY0 812 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 FAM50BQ9Y247 325 aa20.02■□□□□ 0.8
SHKBP1-203ENST00000594298 NFASCO94856 1347 aa20.02■□□□□ 0.79
SHKBP1-203ENST00000594298 CCDC196A0A1B0GTZ2 297 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 CPA1P15085 419 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 RTN1Q16799 776 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 CTC1Q2NKJ3 1217 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 PLPPR4Q7Z2D5 763 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 CRIPAKQ8N1N5 446 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 BRF1Q92994 677 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 PLVAPQ9BX97 442 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 FTHL17Q9BXU8 183 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 AGO3Q9H9G7 860 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 PRKAG3Q9UGI9 489 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 PCDHA2Q9Y5H9 948 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 RALGAPA2Q2PPJ7 1873 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 BRWD1Q9NSI6 2320 aa20.01■□□□□ 0.79
SHKBP1-203ENST00000594298 FAM86C2PA6NEL3 165 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
SHKBP1-203ENST00000594298 GOLGA8BA8MQT2 603 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms