RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ADGRE1Q14246 886 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 PKN1Q16512 942 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 PFKFB3Q16875 520 aaPredicted RBP7.87□□□□□ -1.15
SPG11-224ENST00000561268 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 TMEM92Q6UXU6 159 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 NIPA1Q7RTP0 329 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 NLRX1Q86UT6 975 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 RAB11FIP4Q86YS3 637 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.87□□□□□ -1.15
SPG11-224ENST00000561268 EFCAB3Q8N7B9 438 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 C7orf31Q8N865 590 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 USP38Q8NB14 1042 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 RNF26Q9BY78 433 aaPredicted RBP7.87□□□□□ -1.15
SPG11-224ENST00000561268 ANO3Q9BYT9 981 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 ZMYND12Q9H0C1 365 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 JADE2Q9NQC1 790 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 SLC4A7Q9Y6M7 1214 aa7.87□□□□□ -1.15
SPG11-224ENST00000561268 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 IGKV6D-21A0A0A0MT36 114 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ABHD14A-ACY1A0A1B0GW23 586 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 GSTTP1A0A1W2PQM5 241 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 hCG_1642624A0A1W2PR95 340 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 SPDYE3A6NKU9 549 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 TRAK2O60296 914 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 EFCAB14O75071 495 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ATP9AO75110 1047 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 FOSP01100 380 aaPredicted RBP7.86□□□□□ -1.15
SPG11-224ENST00000561268 SCG2P13521 617 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ANAPC15P60006 121 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ZNF200P98182 395 aaPredicted RBP7.86□□□□□ -1.15
SPG11-224ENST00000561268 MGAT3Q09327 533 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 MTMR1Q13613 665 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 TOB2Q14106 344 aaPredicted RBP7.86□□□□□ -1.15
SPG11-224ENST00000561268 PLEKHG4Q58EX7 1191 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ZNF618Q5T7W0 954 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 BLOC1S2Q6QNY1 142 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 CYFIP1Q7L576 1253 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 HEATR3Q7Z4Q2 680 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 DEFB128Q7Z7B8 93 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 HERC6Q8IVU3 1022 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 RETREG2Q8NC44 543 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 PIBF1Q8WXW3 757 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ZFP91Q96JP5 570 aaPredicted RBP7.86□□□□□ -1.15
SPG11-224ENST00000561268 PCYT2Q99447 389 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 KIF2CQ99661 725 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ALG1Q9BT22 464 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 TM6SF1Q9BZW5 370 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 GLT8D2Q9H1C3 349 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 NKX2-4Q9H2Z4 354 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 RNPEPQ9H4A4 650 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 MLXIPQ9HAP2 919 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ZSWIM6Q9HCJ5 1215 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 MSRAQ9UJ68 235 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 ZNF215Q9UL58 517 aaPredicted RBP7.86□□□□□ -1.15
SPG11-224ENST00000561268 PCDHA6Q9UN73 950 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 PCDHA8Q9Y5H6 950 aa7.86□□□□□ -1.15
SPG11-224ENST00000561268 NRCAMQ92823 1304 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 CCDC196A0A1B0GTZ2 297 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 C17orf102A2RUQ5 167 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 MEIS1O00470 390 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 TREHO43280 583 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 PRPF3O43395 683 aaKnown RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 ATG7O95352 703 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 GJB5O95377 273 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 CYP3A4P08684 503 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 CPA1P15085 419 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 IFNAR1P17181 557 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 CLCN1P35523 988 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 TCF7P36402 384 aaPredicted RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 METAP2P50579 478 aaKnown RBP eCLIP7.85□□□□□ -1.15
SPG11-224ENST00000561268 ADCY7P51828 1080 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 RABGGTBP53611 331 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 NAPAP54920 295 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 DEFB103AP81534 67 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 HTRA4P83105 476 aaPredicted RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 TAP1Q03518 808 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 ITGB3BPQ13352 177 aaPredicted RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 CEP55Q53EZ4 464 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 HS1BP3Q53T59 392 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 PPP2R2DQ66LE6 453 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 SYNE3Q6ZMZ3 975 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 FAM177A1Q8N128 213 aaPredicted RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 SLC17A8Q8NDX2 589 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 BRF1Q92994 677 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 LENG9Q96B70 501 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 JAKMIP1Q96N16 626 aaKnown RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 MXRA8Q9BRK3 442 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 EHMT1Q9H9B1 1298 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 RC3H2Q9HBD1 1191 aaKnown RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 RTEL1Q9NZ71 1219 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 TDRD15B5MCY1 1934 aaKnown RBP7.85□□□□□ -1.15
SPG11-224ENST00000561268 DENND4AQ7Z401 1863 aa7.85□□□□□ -1.15
SPG11-224ENST00000561268 IGSF9BQ9UPX0 1349 aa7.84□□□□□ -1.15
SPG11-224ENST00000561268 KDM3AQ9Y4C1 1321 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms