RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 FAM221BA6H8Z2 402 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 OPLAHO14841 1288 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 TM4SF5O14894 197 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 SEPT4O43236 478 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 LRP3O75074 770 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 GLRX3O76003 335 aaKnown RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 DKK1O94907 266 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 KIF4AO95239 1232 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 MED26O95402 600 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 C8BP07358 591 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 HCLS1P14317 486 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 RFX1P22670 979 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 RPS8P62241 208 aaKnown RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 DLX2Q07687 328 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 TROAPQ12815 778 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAP7Q14244 749 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ANO1Q5XXA6 986 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 OGFOD2Q6N063 350 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 KIAA1211Q6ZU35 1233 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 SPRED2Q7Z698 418 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 PRRT2Q7Z6L0 340 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZNF34Q8IZ26 560 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 GTF3C2Q8WUA4 911 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAP4K1Q92918 833 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 CRBNQ96SW2 442 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 MKNK1Q9BUB5 465 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZNF341Q9BYN7 854 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 TMEM39BQ9GZU3 492 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 GGNBP2Q9H3C7 697 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 CWC22Q9HCG8 908 aaKnown RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ANKMY1Q9P2S6 941 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ZNF70Q9UC06 446 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 TIMELESSQ9UNS1 1208 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 SMG5Q9UPR3 1016 aaKnown RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 WASF3Q9UPY6 502 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP16Q9Y5T5 823 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 HCFC2Q9Y5Z7 792 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 KCNMB2Q9Y691 235 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 CELSR3Q9NYQ7 3312 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 AKAP13Q12802 2813 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 ACACAQ13085 2346 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 UBN2Q6ZU65 1347 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 SHROOM3Q8TF72 1996 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 RFX7Q2KHR2 1363 aa2.9□□□□□ -1.94
TRAV1-1-201ENST00000542354 A6NJR5 290 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 DBX1A6NMT0 343 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 TCP10L2B9ZVM9 353 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 FYB1O15117 783 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 SLC24A1O60721 1099 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 BRD1O95696 1058 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 C8AP07357 584 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 ITGB5P18084 799 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 ATP2B4P23634 1241 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CYP2C19P33261 490 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CDK7P50613 346 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 LIMK1P53667 647 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CCL23P55773 120 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CFHR1Q03591 330 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 PABPC4Q13310 644 aaKnown RBP eCLIP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 TTLL4Q14679 1199 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 NFKBIBQ15653 356 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CCDC6Q16204 474 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CWF19L1Q69YN2 538 aaKnown RBP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 KIF6Q6ZMV9 814 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 PLEKHH3Q7Z736 793 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 KSR1Q8IVT5 923 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 C1orf210Q8IVY1 113 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 ABI1Q8IZP0 508 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 C12orf50Q8NA57 414 aaPredicted RBP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 GALNT11Q8NCW6 608 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 TRPV1Q8NER1 839 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 GPRC5AQ8NFJ5 357 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 BHLHE22Q8NFJ8 381 aaPredicted RBP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CELF1Q92879 486 aaKnown RBP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 NEK1Q96PY6 1258 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 COA1Q9GZY4 146 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 HIPK3Q9H422 1215 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 SOX17Q9H6I2 414 aaPredicted RBP2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 XPNPEP3Q9NQH7 507 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 MORF4L1Q9UBU8 362 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 CCDC39Q9UFE4 941 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 RAB23Q9ULC3 237 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 AGTPBP1Q9UPW5 1226 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 MSRB2Q9Y3D2 182 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 NEUROG3Q9Y4Z2 214 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 PCDHGA2Q9Y5H1 932 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 ZHX2Q9Y6X8 837 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 WDFY3Q8IZQ1 3526 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 ELP1O95163 1332 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 MAP3K15Q6ZN16 1313 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 SALL3Q9BXA9 1300 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 MAPK8IP3Q9UPT6 1336 aa2.9□□□□□ -1.95
TRAV1-1-201ENST00000542354 PSME4Q14997 1843 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 FRMPD3Q5JV73 1810 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 POM121CA8CG34 1229 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 DIAPH1O60610 1272 aaKnown RBP2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 RETP07949 1114 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 RARBP10826 455 aa2.89□□□□□ -1.95
TRAV1-1-201ENST00000542354 CYBAP13498 195 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms