RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ADCY7P51828 1080 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 IGBP1P78318 339 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 FUT2Q10981 343 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 GPM6BQ13491 265 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 PTPROQ16827 1216 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
SNHG1-213ENST00000540725 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 TMEM192Q8IY95 271 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 CYP2W1Q8TAV3 490 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 PGBD1Q96JS3 809 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 PCYT2Q99447 389 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 CDY2AQ9Y6F7 541 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 NFASCO94856 1347 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
SNHG1-213ENST00000540725 RRN3P2A6NIE6 340 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
SNHG1-213ENST00000540725 INSRRP14616 1297 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 MRPS6P82932 125 aaKnown RBP16.14■□□□□ 0.17
SNHG1-213ENST00000540725 ADCK5Q3MIX3 580 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 TIGD5Q53EQ6 642 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 FBXO47Q5MNV8 452 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 CENPQQ7L2Z9 268 aaPredicted RBP16.14■□□□□ 0.17
SNHG1-213ENST00000540725 ZBTB10Q96DT7 871 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 IL17RAQ96F46 866 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 SDF4Q9BRK5 362 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 C1QTNF1Q9BXJ1 281 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 AZI2Q9H6S1 392 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 RAPGEFL1Q9UHV5 662 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 V9GY48 417 aaPredicted RBP16.14■□□□□ 0.17
SNHG1-213ENST00000540725 KIAA1671Q9BY89 1806 aa16.14■□□□□ 0.17
SNHG1-213ENST00000540725 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 GOLGA8AA7E2F4 631 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 hCG_1984214I3L0E3 225 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 STXBP3O00186 592 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 RPLP2P05387 115 aaKnown RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ARP10275 920 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 KCNA5P22460 613 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ACTR2P61160 394 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 LEXMQ3ZCV2 418 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 CEP55Q53EZ4 464 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 FIBCD1Q8N539 461 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ZNF713Q8N859 430 aaPredicted RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 FAM49AQ9H0Q0 323 aaPredicted RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 TRPC6Q9Y210 931 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 SMCO2A6NFE2 343 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ENPP3O14638 875 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 CDC45O75419 566 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 CTNNB1P35222 781 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ITGB3BPQ13352 177 aaPredicted RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 KRT32Q14532 448 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 PLCB4Q15147 1175 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 BANK1Q8NDB2 785 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 RC3H2Q9HBD1 1191 aaKnown RBP16.13■□□□□ 0.17
SNHG1-213ENST00000540725 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
SNHG1-213ENST00000540725 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 MEIS1O00470 390 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 CDC27P30260 824 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 CD52P31358 61 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 SREBF1P36956 1147 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 STAT5BP51692 787 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 IER5Q5VY09 327 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.12■□□□□ 0.17
SNHG1-213ENST00000540725 TRAPPC12Q8WVT3 735 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 EPHX3Q9H6B9 360 aa16.12■□□□□ 0.17
SNHG1-213ENST00000540725 AGO3Q9H9G7 860 aaKnown RBP16.12■□□□□ 0.17
SNHG1-213ENST00000540725 AGO4Q9HCK5 861 aaKnown RBP16.12■□□□□ 0.17
SNHG1-213ENST00000540725 FAM217BQ9NTX9 383 aaPredicted RBP16.12■□□□□ 0.17
SNHG1-213ENST00000540725 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
SNHG1-213ENST00000540725 M0QZ92 97 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 LINC00271P0C7V0 271 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
SNHG1-213ENST00000540725 RCAN1P53805 252 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 TCEAL5Q5H9L2 206 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 LINC01599Q8WXQ3 324 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 NSUN3Q9H649 340 aaKnown RBP16.11■□□□□ 0.17
SNHG1-213ENST00000540725 RWDD3Q9Y3V2 267 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 TRPV2Q9Y5S1 764 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 SQORQ9Y6N5 450 aa16.11■□□□□ 0.17
SNHG1-213ENST00000540725 POTEB3A0JP26 581 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 C5orf67F2Z3F1 127 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 ATG7O95352 703 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 RB1P06400 928 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
SNHG1-213ENST00000540725 ZNF76P36508 570 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 BMPR1AP36894 532 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 FGD1P98174 961 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 TMEM62Q0P6H9 643 aa16.1■□□□□ 0.17
SNHG1-213ENST00000540725 PTCRAQ6ISU1 281 aaPredicted RBP16.1■□□□□ 0.17
SNHG1-213ENST00000540725 POTEBQ6S5H4 581 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms