RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 GUCD1Q96NT3 240 aa19.53■□□□□ 0.72
SFSWAP-205ENST00000537164 KIF2CQ99661 725 aa19.53■□□□□ 0.72
SFSWAP-205ENST00000537164 ZNF577Q9BSK1 485 aa19.53■□□□□ 0.72
SFSWAP-205ENST00000537164 AZI2Q9H6S1 392 aa19.53■□□□□ 0.72
SFSWAP-205ENST00000537164 STXBP5LQ9Y2K9 1186 aa19.53■□□□□ 0.72
SFSWAP-205ENST00000537164 RSPH10B2B2RC85 870 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 RSPH10BP0C881 870 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 FDPSP14324 419 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 XBP1P17861 261 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 THPOP40225 353 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 STAT5BP51692 787 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 PPFIA1Q13136 1202 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 RAB30Q15771 203 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 PRR16Q569H4 304 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 FAM26DQ5JW98 314 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 MARCH8Q5T0T0 291 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 ZNF746Q6NUN9 644 aaPredicted RBP19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 CNKSR3Q6P9H4 555 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 MOXD1Q6UVY6 613 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 SIP14410 1827 aa19.52■□□□□ 0.72
SFSWAP-205ENST00000537164 RRN3P2A6NIE6 340 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 MARK3P27448 753 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 PBX2P40425 430 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 GRIK4Q16099 956 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 Q4G0T1 1027 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 TAF2Q6P1X5 1199 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 SMAP1Q8IYB5 467 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 NECAB1Q8N987 351 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 WASF1Q92558 559 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 TIFAQ96CG3 184 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 MBOAT7Q96N66 472 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 SLC9A7Q96T83 725 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 ORC3Q9UBD5 711 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 MICAL3Q7RTP6 2002 aa19.51■□□□□ 0.71
SFSWAP-205ENST00000537164 ZBBXA8MT70 800 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 MSH4O15457 936 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 INSRRP14616 1297 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 KRT76Q01546 638 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 PLCB4Q15147 1175 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 KRT25Q7Z3Z0 450 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 CCDC60Q8IWA6 550 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 NSUN7Q8NE18 718 aaKnown RBP19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 RIT2Q99578 217 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 TUBE1Q9UJT0 475 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 KCNJ14Q9UNX9 436 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 PCDHA11Q9Y5I1 949 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 A0A0C4DFX4 3053 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 PRUNE2Q8WUY3 3088 aa19.5■□□□□ 0.71
SFSWAP-205ENST00000537164 ABHD14A-ACY1A0A1B0GW23 586 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 DDX39AO00148 427 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 EFCAB14O75071 495 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 RPLP2P05387 115 aaKnown RBP19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 MKRN4PQ13434 485 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 NONOQ15233 471 aaKnown RBP eCLIP19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 PLEKHG4Q58EX7 1191 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 FAM160B1Q5W0V3 765 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 MIS18BP1Q6P0N0 1132 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 SLC5A5Q92911 643 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 FAM161BQ96MY7 647 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 ZNF576Q9H609 170 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 MSRAQ9UJ68 235 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 LIMCH1Q9UPQ0 1083 aa19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 MAFBQ9Y5Q3 323 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-205ENST00000537164 UNC80Q8N2C7 3258 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 POTEB3A0JP26 581 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 WDR5P61964 334 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 ST3GAL1Q11201 340 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 TCTN1Q2MV58 587 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 POTEBQ6S5H4 581 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 RUFY4Q6ZNE9 571 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 CDX2Q99626 313 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 ZNF302Q9NR11 478 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 GJB4Q9NTQ9 266 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 YBX2Q9Y2T7 364 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 PCDHA10Q9Y5I2 948 aa19.48■□□□□ 0.71
SFSWAP-205ENST00000537164 HBP1O60381 514 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 PSMD10O75832 226 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 IKBKEQ14164 716 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 SWSAP1Q6NVH7 229 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 B3GNT9Q6UX72 402 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 ATP8B4Q8TF62 1192 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 TRPC6Q9Y210 931 aa19.47■□□□□ 0.71
SFSWAP-205ENST00000537164 COL1A2P08123 1366 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 BACH1O14867 736 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 DTNBO60941 627 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 TDP2O95551 362 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 CHRNA1P02708 482 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 PSAPP07602 524 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 ATP4AP20648 1035 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 MGAT3Q09327 533 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 INF2Q27J81 1249 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 PPP4R3AQ6IN85 833 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 RSPH3Q86UC2 560 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 HERC6Q8IVU3 1022 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
SFSWAP-205ENST00000537164 DBF4BQ8NFT6 615 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms