RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SRGAP2BP0DMP2 458 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 DNAJB1P25685 340 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 NRIP1P48552 1158 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 PPFIA1Q13136 1202 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 ANKRD45Q5TZF3 282 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 FCHSD1Q86WN1 690 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 CRIPAKQ8N1N5 446 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 SPPL3Q8TCT6 385 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 POF1BQ8WVV4 589 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-223ENST00000533079 ERAP1Q9NZ08 941 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 TTC3P53804 2025 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 CSPG5O95196 566 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 TCF7P36402 384 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 SEMA3FQ13275 785 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 UTP14CQ5TAP6 766 aaKnown RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 PCNX4Q63HM2 1172 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 PDE12Q6L8Q7 609 aaKnown RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 RUFY4Q6ZNE9 571 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 HOMER1Q86YM7 354 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 SUSD6Q92537 303 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 ATOH1Q92858 354 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 CDHR1Q96JP9 859 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 BCAS3Q9H6U6 928 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 RIOX1Q9H6W3 641 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-223ENST00000533079 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
CAPN1-223ENST00000533079 PLXNA4Q9HCM2 1894 aa14.33□□□□□ -0.11
CAPN1-223ENST00000533079 PNMA6FA0A0J9YX94 578 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 M0QZ92 97 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 SDSP20132 328 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 AVPR2P30518 371 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 VCPP55072 806 aaKnown RBP14.33□□□□□ -0.12
CAPN1-223ENST00000533079 AAMPQ13685 434 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 SEC23AQ15436 765 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 GRIK4Q16099 956 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 IER5Q5VY09 327 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 NLRX1Q86UT6 975 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.12
CAPN1-223ENST00000533079 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 DOCK5Q9H7D0 1870 aa14.33□□□□□ -0.12
CAPN1-223ENST00000533079 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 HIP1O00291 1037 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 SCG2P13521 617 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 CD52P31358 61 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 GRM4Q14833 912 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 ATP8B4Q8TF62 1192 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 DNAJB3Q8WWF6 145 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 GPRASP2Q96D09 838 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
CAPN1-223ENST00000533079 RPGRIP1Q96KN7 1286 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 PIGSQ96S52 555 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 TLE6Q9H808 572 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 TLR9Q9NR96 1032 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 FAM86C1Q9NVL1 165 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 IGSF9BQ9UPX0 1349 aa14.32□□□□□ -0.12
CAPN1-223ENST00000533079 RRN3P2A6NIE6 340 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 GALR2O43603 387 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-223ENST00000533079 SP4Q02446 784 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 PAK2Q13177 524 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 DUSP6Q16828 381 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 MARCH8Q5T0T0 291 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 TMEM184AQ6ZMB5 413 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 ERMP1Q7Z2K6 904 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 RBM23Q86U06 439 aaKnown RBP14.31□□□□□ -0.12
CAPN1-223ENST00000533079 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 SEPT1Q8WYJ6 367 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 CUL5Q93034 780 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 SMARCAD1Q9H4L7 1026 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
CAPN1-223ENST00000533079 DIAPH3Q9NSV4 1193 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 TRPV2Q9Y5S1 764 aa14.31□□□□□ -0.12
CAPN1-223ENST00000533079 DMDP11532 3685 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 NBL1P41271 181 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 HDAC1Q13547 482 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-223ENST00000533079 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
CAPN1-223ENST00000533079 UBALD2Q8IYN6 164 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 RIPOR3Q96MK2 946 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 RTEL1Q9NZ71 1219 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 LRFN2Q9ULH4 789 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 PADI3Q9ULW8 664 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 NR2E1Q9Y466 385 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 KDM3AQ9Y4C1 1321 aa14.3□□□□□ -0.12
CAPN1-223ENST00000533079 CYTH3O43739 400 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 KCNA2P16389 499 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 HOXB8P17481 243 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-223ENST00000533079 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
CAPN1-223ENST00000533079 MTMR3Q13615 1198 aa14.29□□□□□ -0.12
CAPN1-223ENST00000533079 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms