RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 UBE3AQ05086 875 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 SLC35G1Q2M3R5 365 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 IQCA1Q86XH1 822 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 NPAS4Q8IUM7 802 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 STAG2Q8N3U4 1231 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 RASGRP4Q8TDF6 673 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 KAT14Q9H8E8 782 aa18.85■□□□□ 0.61
CHMP4A-203ENST00000527154 DNAH14Q0VDD8 3507 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 DUSP6Q16828 381 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 CYFIP1Q7L576 1253 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 ZFP91Q96JP5 570 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 ZSCAN10Q96SZ4 725 aaPredicted RBP18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 FTHL17Q9BXU8 183 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 TRPC6Q9Y210 931 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 PCDHGC5Q9Y5F6 944 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 PCDHA1Q9Y5I3 950 aa18.84■□□□□ 0.61
CHMP4A-203ENST00000527154 FIBPO43427 364 aa18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 KDM4AO75164 1064 aa18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 GNPTABQ3T906 1256 aa18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 MARCH8Q5T0T0 291 aa18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 VAT1LQ9HCJ6 419 aa18.83■□□□□ 0.6
CHMP4A-203ENST00000527154 PLXNA4Q9HCM2 1894 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 GCOM1H8Y6P7 765 aaPredicted RBP18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 FSCN2O14926 492 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 CSPG5O95196 566 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 RPLP2P05387 115 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 POLR2MP0CAP2 368 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 RBM10P98175 930 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 RBM23Q86U06 439 aaKnown RBP18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 TLE6Q9H808 572 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 MAD2L2Q9UI95 211 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 CDY2AQ9Y6F7 541 aa18.82■□□□□ 0.6
CHMP4A-203ENST00000527154 PALM3A6NDB9 673 aaPredicted RBP18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 SYCE2Q6PIF2 218 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 RSPH3Q86UC2 560 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 TMEM105Q8N8V8 129 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 NEK1Q96PY6 1258 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 RIOX1Q9H6W3 641 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
CHMP4A-203ENST00000527154 ZNF292O60281 2723 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 KLRF2D3W0D1 207 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 CD52P31358 61 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 NMIQ13287 307 aaPredicted RBP18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 PDE12Q6L8Q7 609 aaKnown RBP18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 UBALD2Q8IYN6 164 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 DNAJB3Q8WWF6 145 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 DMXL1Q9Y485 3027 aa18.8■□□□□ 0.6
CHMP4A-203ENST00000527154 IGSF9BQ9UPX0 1349 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 KDM3AQ9Y4C1 1321 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 ZNF213O14771 459 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 STAG3L1P0CL83 205 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 ID4P47928 161 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 PDE1AP54750 535 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 MRPS6P82932 125 aaKnown RBP18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 TRAF1Q13077 416 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 PPFIA1Q13136 1202 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 SEC23AQ15436 765 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 GRIK4Q16099 956 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 ANKRD54Q6NXT1 300 aa18.79■□□□□ 0.6
CHMP4A-203ENST00000527154 KAT6AQ92794 2004 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 DOCK5Q9H7D0 1870 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 B4E1Z4 1266 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 PER2O15055 1255 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 SCG2P13521 617 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 ERVFC1P60507 584 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 UTP14CQ5TAP6 766 aaKnown RBP18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 XRRA1Q6P2D8 792 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 TMX1Q9H3N1 280 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 PADI3Q9ULW8 664 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 SORCS3Q9UPU3 1222 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 LZTS1Q9Y250 596 aa18.78■□□□□ 0.6
CHMP4A-203ENST00000527154 GSTTP1A0A1W2PQM5 241 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 CYTH3O43739 400 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 BRD1O95696 1058 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 HOXB8P17481 243 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 TCF7P36402 384 aaPredicted RBP18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 GATMP50440 423 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 PAN2Q504Q3 1202 aaKnown RBP18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 KREMEN2Q8NCW0 462 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.6
CHMP4A-203ENST00000527154 KCNA2P16389 499 aa18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 MTMR3Q13615 1198 aa18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 MCTP2Q6DN12 878 aa18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 GIMAP8Q8ND71 665 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 NKD2Q969F2 451 aaPredicted RBP18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
CHMP4A-203ENST00000527154 WDR87Q6ZQQ6 2873 aa18.75■□□□□ 0.59
CHMP4A-203ENST00000527154 FGF18O76093 207 aa18.75■□□□□ 0.59
CHMP4A-203ENST00000527154 SARSP49591 514 aaKnown RBP18.75■□□□□ 0.59
CHMP4A-203ENST00000527154 CLCN5P51795 746 aa18.75■□□□□ 0.59
CHMP4A-203ENST00000527154 MFAP1P55081 439 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms