RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 ACTR10Q9NZ32 417 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 MYOTQ9UBF9 498 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 MRVI1Q9Y6F6 885 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 EXOC5O00471 708 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 PPFIA4O75335 1185 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 DGKIO75912 1065 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 AMHP03971 560 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 PAX3P23760 479 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 GFRA1P56159 465 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 NFATC3Q12968 1075 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 BRD3Q15059 726 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 TESK1Q15569 626 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 L1TD1Q5T7N2 865 aaKnown RBP4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 AMOTL1Q8IY63 956 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 TMEM145Q8NBT3 493 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 SGSM3Q96HU1 749 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 TMX4Q9H1E5 349 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 BARX1Q9HBU1 254 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 TYW1Q9NV66 732 aaKnown RBP4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 TCAF1Q9Y4C2 921 aa4.54□□□□□ -1.68
HMGB3P15-201ENST00000507326 CCER2I3L3R5 266 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 NPHP1O15259 732 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 DDAH1O94760 285 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 MAN1A1P33908 653 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 ACVRL1P37023 503 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 SELENOPP49908 381 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 GRIN1Q05586 938 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 RBL2Q08999 1139 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 PLEKHG6Q3KR16 790 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 SLFN13Q68D06 897 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 MRM1Q6IN84 353 aaKnown RBP4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZNF280DQ6N043 979 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 CKAP2LQ8IYA6 745 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 PHOSPHO1Q8TCT1 267 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 NUDT11Q96G61 164 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 CCDC140Q96MF4 163 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 WWC2-AS2Q96NR7 200 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 SMOC1Q9H4F8 434 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 GNL3LQ9NVN8 582 aaKnown RBP4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 ASH2LQ9UBL3 628 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 ANAPC4Q9UJX5 808 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 PNMA2Q9UL42 364 aa4.53□□□□□ -1.68
HMGB3P15-201ENST00000507326 OVOL3O00110 214 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 CYR61O00622 381 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 KIF3BO15066 747 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 MUSKO15146 869 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 FZD7O75084 574 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 ZNF623O75123 536 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 COL6A1P12109 1028 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 ATF4P18848 351 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 COPB2P35606 906 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 TBX4P57082 545 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 RHBDL3P58872 404 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 SPDYAQ5MJ70 313 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 USP51Q70EK9 711 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 PROSER1Q86XN7 944 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 FMNL3Q8IVF7 1028 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 C1orf159Q96HA4 380 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 GMLQ99445 158 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 TINF2Q9BSI4 451 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 JAM3Q9BX67 310 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 MEGF9Q9H1U4 602 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 IFT57Q9NWB7 429 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 PPARGC1AQ9UBK2 798 aaKnown RBP4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 GABBR1Q9UBS5 961 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 ADAM29Q9UKF5 820 aa4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 G3BP2Q9UN86 482 aaKnown RBP4.52□□□□□ -1.69
HMGB3P15-201ENST00000507326 PATE3B3GLJ2 98 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 KRIT1O00522 736 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 TCERG1O14776 1098 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLC27A2O14975 620 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 MAFKO60675 156 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 SSBP05455 408 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 POU5F1BQ06416 359 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 FOXD4Q12950 439 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 MYBPC2Q14324 1141 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 BMS1Q14692 1282 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 R3HDM1Q15032 1099 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 PPP2R5AQ15172 486 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 TNNI3KQ59H18 835 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 SLC35F1Q5T1Q4 408 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 VASNQ6EMK4 673 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 CLEC4GQ6UXB4 293 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 RALYLQ86SE5 291 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 RBM12BQ8IXT5 1001 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 PDILTQ8N807 584 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 PIP4K2CQ8TBX8 421 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 Q8TCH9 128 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 PPM1EQ8WY54 764 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 JDP2Q8WYK2 163 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 DLL4Q9NR61 685 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 DDX56Q9NY93 547 aaKnown RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 FBXO9Q9UK97 447 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 HS3ST3A1Q9Y663 406 aa4.51□□□□□ -1.69
HMGB3P15-201ENST00000507326 MSCO60682 206 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 CAND2O75155 1236 aa4.5□□□□□ -1.69
HMGB3P15-201ENST00000507326 KLHL18O94889 574 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms