RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TNPO1Q92973 898 aaKnown RBP26.57■■□□□ 1.84
COL27A1-208ENST00000494780 PCYT2Q99447 389 aa26.57■■□□□ 1.84
COL27A1-208ENST00000494780 AZI2Q9H6S1 392 aa26.57■■□□□ 1.84
COL27A1-208ENST00000494780 NFASCO94856 1347 aa26.57■■□□□ 1.84
COL27A1-208ENST00000494780 INSRRP14616 1297 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 FUT2Q10981 343 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 RTN1Q16799 776 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 TSGA10IPQ3SY00 556 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 FBXO47Q5MNV8 452 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 TYW1BQ6NUM6 668 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 FIBCD1Q8N539 461 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 SDF4Q9BRK5 362 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 BRPF3Q9ULD4 1205 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 CDY2AQ9Y6F7 541 aa26.56■■□□□ 1.84
COL27A1-208ENST00000494780 ZBTB43O43298 467 aa26.55■■□□□ 1.84
COL27A1-208ENST00000494780 KCNA5P22460 613 aa26.55■■□□□ 1.84
COL27A1-208ENST00000494780 ADCY7P51828 1080 aa26.55■■□□□ 1.84
COL27A1-208ENST00000494780 IGBP1P78318 339 aa26.55■■□□□ 1.84
COL27A1-208ENST00000494780 MRPS6P82932 125 aaKnown RBP26.55■■□□□ 1.84
COL27A1-208ENST00000494780 TSHZ1Q6ZSZ6 1077 aa26.55■■□□□ 1.84
COL27A1-208ENST00000494780 RALGAPA2Q2PPJ7 1873 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 ENPP3O14638 875 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 CEP55Q53EZ4 464 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 BANK1Q8NDB2 785 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 CYP2W1Q8TAV3 490 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 TCEANC2Q96MN5 208 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 ANO3Q9BYT9 981 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 GLT8D2Q9H1C3 349 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 RWDD3Q9Y3V2 267 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 SQORQ9Y6N5 450 aa26.54■■□□□ 1.84
COL27A1-208ENST00000494780 V9GY48 417 aaPredicted RBP26.54■■□□□ 1.84
COL27A1-208ENST00000494780 NLRC5Q86WI3 1866 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 RB1P06400 928 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 ACTR2P61160 394 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 AP3B2Q13367 1082 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 IER5Q5VY09 327 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 PLPPR4Q7Z2D5 763 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.53■■□□□ 1.84
COL27A1-208ENST00000494780 PGBD1Q96JS3 809 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 EPHX3Q9H6B9 360 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 BARHL2Q9NY43 387 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 TRPC6Q9Y210 931 aa26.53■■□□□ 1.84
COL27A1-208ENST00000494780 SMCO2A6NFE2 343 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 GOLGA8AA7E2F4 631 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 GOLGA8BA8MQT2 603 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 C5orf67F2Z3F1 127 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 STXBP3O00186 592 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 ARP10275 920 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 CTNNB1P35222 781 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 STAT5BP51692 787 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 RCAN1P53805 252 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 KRT32Q14532 448 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 PLCB4Q15147 1175 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 ADCK5Q3MIX3 580 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 CENPQQ7L2Z9 268 aaPredicted RBP26.52■■□□□ 1.84
COL27A1-208ENST00000494780 ADGRA3Q8IWK6 1321 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 RASEFQ8IZ41 740 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 FAM49AQ9H0Q0 323 aaPredicted RBP26.52■■□□□ 1.84
COL27A1-208ENST00000494780 NSUN3Q9H649 340 aaKnown RBP26.52■■□□□ 1.84
COL27A1-208ENST00000494780 RC3H2Q9HBD1 1191 aaKnown RBP26.52■■□□□ 1.84
COL27A1-208ENST00000494780 AGO4Q9HCK5 861 aaKnown RBP26.52■■□□□ 1.84
COL27A1-208ENST00000494780 RAPGEFL1Q9UHV5 662 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 PCDHA2Q9Y5H9 948 aa26.52■■□□□ 1.84
COL27A1-208ENST00000494780 MEIS1O00470 390 aa26.51■■□□□ 1.83
COL27A1-208ENST00000494780 BMPR1AP36894 532 aa26.51■■□□□ 1.83
COL27A1-208ENST00000494780 SREBF1P36956 1147 aa26.51■■□□□ 1.83
COL27A1-208ENST00000494780 ITGB3BPQ13352 177 aaPredicted RBP26.51■■□□□ 1.83
COL27A1-208ENST00000494780 PUS10Q3MIT2 529 aaKnown RBP26.51■■□□□ 1.83
COL27A1-208ENST00000494780 NEK9Q8TD19 979 aa26.51■■□□□ 1.83
COL27A1-208ENST00000494780 AGO3Q9H9G7 860 aaKnown RBP26.51■■□□□ 1.83
COL27A1-208ENST00000494780 TRPV2Q9Y5S1 764 aa26.51■■□□□ 1.83
COL27A1-208ENST00000494780 KLF18A0A0U1RQI7 1052 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 M0QZ92 97 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 ATG7O95352 703 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 HMGB1P09429 215 aaKnown RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 LINC00271P0C7V0 271 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 CD52P31358 61 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 CLK2P49760 499 aaKnown RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 SLC26A2P50443 739 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 TCEAL5Q5H9L2 206 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 PTCRAQ6ISU1 281 aaPredicted RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 FAM178BQ8IXR5 827 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 CLP1Q92989 425 aaKnown RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 ZNF689Q96CS4 500 aaPredicted RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 ZBTB10Q96DT7 871 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 PABPC5Q96DU9 382 aaKnown RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 C11orf84Q9BUA3 381 aaPredicted RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 FTHL17Q9BXU8 183 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 LMAN2LQ9H0V9 348 aa26.5■■□□□ 1.83
COL27A1-208ENST00000494780 FAM217BQ9NTX9 383 aaPredicted RBP26.5■■□□□ 1.83
COL27A1-208ENST00000494780 COL19A1Q14993 1142 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 NIPA1Q7RTP0 329 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 SKAP1Q86WV1 359 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 CD320Q9NPF0 282 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 TMEM260Q9NX78 707 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 TTC3P53804 2025 aa26.49■■□□□ 1.83
COL27A1-208ENST00000494780 SMIM35A0A1B0GVV1 85 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 POTEB3A0JP26 581 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 CDC45O75419 566 aa26.48■■□□□ 1.83
COL27A1-208ENST00000494780 DGKIO75912 1065 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms