RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 PPFIA1Q13136 1202 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 GRIK4Q16099 956 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PKN1Q16512 942 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PLEKHG4Q58EX7 1191 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PPP1R18Q6NYC8 613 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 MYOCDQ8IZQ8 938 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 PCYT2Q99447 389 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 RAD9AQ99638 391 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 SDF4Q9BRK5 362 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 SLC26A6Q9BXS9 759 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 SMARCAD1Q9H4L7 1026 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 NCOA5Q9HCD5 579 aaKnown RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 AGO4Q9HCK5 861 aaKnown RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 JPH1Q9HDC5 661 aaPredicted RBP10.95□□□□□ -0.66
MSH5-218ENST00000494646 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 WDR81Q562E7 1941 aa10.95□□□□□ -0.66
MSH5-218ENST00000494646 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 FAM86B1E9PN63 330 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 hCG_1984214I3L0E3 225 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 MEIS1O00470 390 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 CHRNA1P02708 482 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 FAM86B2P0C5J1 330 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 INSRRP14616 1297 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 RCAN1P53805 252 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 ACTR2P61160 394 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 ITGB3BPQ13352 177 aaPredicted RBP10.94□□□□□ -0.66
MSH5-218ENST00000494646 NTRK3Q16288 839 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 RUFY3Q7L099 469 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 PLA2G4DQ86XP0 818 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 ZNF713Q8N859 430 aaPredicted RBP10.94□□□□□ -0.66
MSH5-218ENST00000494646 RASGRP4Q8TDF6 673 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 SEPT8Q92599 483 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 AGXT2Q9BYV1 514 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 GLT8D2Q9H1C3 349 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 AZI2Q9H6S1 392 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 MTCH2Q9Y6C9 303 aa10.94□□□□□ -0.66
MSH5-218ENST00000494646 SIP14410 1827 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 NFASCO94856 1347 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
MSH5-218ENST00000494646 EFCAB14O75071 495 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 AMHP03971 560 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 SREBF1P36956 1147 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 STAT5BP51692 787 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TMEM62Q0P6H9 643 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 STK3Q13188 491 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 GRB10Q13322 594 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 AP3B2Q13367 1082 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
MSH5-218ENST00000494646 PLCB4Q15147 1175 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 SKIV2LQ15477 1246 aaKnown RBP10.93□□□□□ -0.66
MSH5-218ENST00000494646 FAM26DQ5JW98 314 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 MARCH8Q5T0T0 291 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
MSH5-218ENST00000494646 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TRAPPC12Q8WVT3 735 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 ZMYND12Q9H0C1 365 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 FAM49AQ9H0Q0 323 aaPredicted RBP10.93□□□□□ -0.66
MSH5-218ENST00000494646 VPS54Q9P1Q0 977 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TUBE1Q9UJT0 475 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
MSH5-218ENST00000494646 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 LINC01553A4QN01 128 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 DTNBO60941 627 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 CAND2O75155 1236 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 CCNE2O96020 404 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 GHRP10912 638 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 IFNAR1P17181 557 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 GNA11P29992 359 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 ABHD15Q6UXT9 468 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 REXO1Q8N1G1 1221 aaKnown RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 CCDC12Q8WUD4 166 aaPredicted RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 TOP1MTQ969P6 601 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 RNF26Q9BY78 433 aaPredicted RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 UPF3BQ9BZI7 483 aaKnown RBP10.92□□□□□ -0.66
MSH5-218ENST00000494646 SUGCTQ9HAC7 445 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 INSL6Q9Y581 213 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 CDY2AQ9Y6F7 541 aa10.92□□□□□ -0.66
MSH5-218ENST00000494646 POTEB3A0JP26 581 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 RRN3P2A6NIE6 340 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 BACH1O14867 736 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 DHX15O43143 795 aaKnown RBP10.91□□□□□ -0.66
MSH5-218ENST00000494646 LPXNO60711 386 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 ATG7O95352 703 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 CYP3A4P08684 503 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 NLRP5P59047 1200 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 TFF2Q03403 129 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 SSRP1Q08945 709 aaKnown RBP10.91□□□□□ -0.66
MSH5-218ENST00000494646 MGAT3Q09327 533 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 LPIN1Q14693 890 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 TJAP1Q5JTD0 557 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 SWSAP1Q6NVH7 229 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
MSH5-218ENST00000494646 POTEBQ6S5H4 581 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms