RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SMCO2A6NFE2 343 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 DLL1O00548 723 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 PRPF3O43395 683 aaKnown RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 PARNO95453 639 aaKnown RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 CTSHP09668 335 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 THPOP40225 353 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 RUFY3Q7L099 469 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 NIPA1Q7RTP0 329 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 NLRX1Q86UT6 975 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 CCDC60Q8IWA6 550 aaPredicted RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 RETREG2Q8NC44 543 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
SRSF4-204ENST00000489898 SLC28A3Q9HAS3 691 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 MSRAQ9UJ68 235 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
SRSF4-204ENST00000489898 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 ABHD14A-ACY1A0A1B0GW23 586 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 RSPH10B2B2RC85 870 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 DTNBO60941 627 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 RSPH10BP0C881 870 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 ACTN1P12814 892 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 MARK3P27448 753 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 ACTR2P61160 394 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 LPIN1Q14693 890 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 PLCB4Q15147 1175 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 GRIK4Q16099 956 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 B3GNT9Q6UX72 402 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 SEPT1Q8WYJ6 367 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 CDHR1Q96JP9 859 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 AIFM3Q96NN9 605 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
SRSF4-204ENST00000489898 TM6SF1Q9BZW5 370 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 CERS4Q9HA82 394 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 SLC9A2Q9UBY0 812 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
SRSF4-204ENST00000489898 MAFGO15525 162 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 REC8O95072 547 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 CIITAP33076 1130 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 GRB10Q13322 594 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 JAKMIP3Q5VZ66 844 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 LINC01465Q8N7H1 131 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 GIMAP8Q8ND71 665 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-204ENST00000489898 GDPD5Q8WTR4 605 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.25
SRSF4-204ENST00000489898 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
SRSF4-204ENST00000489898 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 VPS54Q9P1Q0 977 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 TUBE1Q9UJT0 475 aa13.5□□□□□ -0.25
SRSF4-204ENST00000489898 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-204ENST00000489898 LARGE1O95461 756 aa13.49□□□□□ -0.25
SRSF4-204ENST00000489898 CTDNEP1O95476 244 aa13.49□□□□□ -0.25
SRSF4-204ENST00000489898 FOSP01100 380 aaPredicted RBP13.49□□□□□ -0.25
SRSF4-204ENST00000489898 PPFIA1Q13136 1202 aa13.49□□□□□ -0.25
SRSF4-204ENST00000489898 FBXO47Q5MNV8 452 aa13.49□□□□□ -0.25
SRSF4-204ENST00000489898 REXO1Q8N1G1 1221 aaKnown RBP13.49□□□□□ -0.25
SRSF4-204ENST00000489898 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
SRSF4-204ENST00000489898 INSRRP14616 1297 aa13.48□□□□□ -0.25
SRSF4-204ENST00000489898 ERVK-21P61565 698 aa13.48□□□□□ -0.25
SRSF4-204ENST00000489898 CCT2P78371 535 aaKnown RBP13.48□□□□□ -0.25
SRSF4-204ENST00000489898 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
SRSF4-204ENST00000489898 MBOAT7Q96N66 472 aa13.48□□□□□ -0.25
SRSF4-204ENST00000489898 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
SRSF4-204ENST00000489898 GAS2L1Q99501 681 aaPredicted RBP13.48□□□□□ -0.25
SRSF4-204ENST00000489898 KDM3AQ9Y4C1 1321 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TLL1O43897 1013 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 ZNF862O60290 1169 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 GHRP10912 638 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 KCNJ6P48051 423 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 SCRN1Q12765 414 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 UGCGQ16739 394 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TAF2Q6P1X5 1199 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 PLPPR4Q7Z2D5 763 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 RTN4RL1Q86UN2 441 aaPredicted RBP13.47□□□□□ -0.25
SRSF4-204ENST00000489898 DAGLBQ8NCG7 672 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 DNAJB3Q8WWF6 145 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 GJA10Q969M2 543 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TOP1MTQ969P6 601 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 SUGCTQ9HAC7 445 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 TPCN1Q9ULQ1 816 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
SRSF4-204ENST00000489898 DENND4AQ7Z401 1863 aa13.46□□□□□ -0.25
SRSF4-204ENST00000489898 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.25
SRSF4-204ENST00000489898 MSH4O15457 936 aa13.46□□□□□ -0.25
SRSF4-204ENST00000489898 EFCAB14O75071 495 aa13.46□□□□□ -0.25
SRSF4-204ENST00000489898 STBD1O95210 358 aa13.46□□□□□ -0.25
SRSF4-204ENST00000489898 SEC24BO95487 1268 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms