RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LAD1O00515 517 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 BACH1O14867 736 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 MARCH6O60337 910 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 RAG1P15918 1043 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 BMP8BP34820 402 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 BFSP2Q13515 415 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 TTC38Q5R3I4 469 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 GDF6Q6KF10 455 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 SERINC5Q86VE9 423 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 HAS1Q92839 578 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 ATP6V0A1Q93050 837 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 GDF15Q99988 308 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 HIPK3Q9H422 1215 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 VAV3Q9UKW4 847 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 ZMYND8Q9ULU4 1186 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-212ENST00000489728 TELO2Q9Y4R8 837 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
CPSF7-212ENST00000489728 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 CEP290O15078 2479 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 HBP1O60381 514 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPSF7-212ENST00000489728 HSP90AA1P07900 732 aaKnown RBP12.48□□□□□ -0.41
CPSF7-212ENST00000489728 ADAM17P78536 824 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 MCTP1Q6DN14 999 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 MFSD5Q6N075 450 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 SWSAP1Q6NVH7 229 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 TAF2Q6P1X5 1199 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 MIER3Q7Z3K6 550 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 SH3RF1Q7Z6J0 888 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 NEK9Q8TD19 979 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 ATP8B4Q8TF62 1192 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
CPSF7-212ENST00000489728 CTAGE1Q96RT6 745 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 RNPEPQ9H4A4 650 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
CPSF7-212ENST00000489728 MYH9P35579 1960 aaKnown RBP12.47□□□□□ -0.41
CPSF7-212ENST00000489728 WDR81Q562E7 1941 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 MBLAC1A4D2B0 266 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-212ENST00000489728 PFKMP08237 780 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 SYN1P17600 705 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 SYT1P21579 422 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 MCM7P33993 719 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 RFC2P35250 354 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 PRPHP41219 470 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 MAGEA10P43363 369 aaPredicted RBP12.47□□□□□ -0.41
CPSF7-212ENST00000489728 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 PLCB4Q15147 1175 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 GRIK4Q16099 956 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 PRO3102Q9H379 93 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
CPSF7-212ENST00000489728 WNT7AO00755 349 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 CHMP2AO43633 222 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 BMP15O95972 392 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 MARK3P27448 753 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 TOB1P50616 345 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-212ENST00000489728 PSMC5P62195 406 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 FPGSQ05932 587 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 PPIGQ13427 754 aaKnown RBP eCLIP12.46□□□□□ -0.412e-7■□□□□ 11.1
CPSF7-212ENST00000489728 BECN1Q14457 450 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 EPHA7Q15375 998 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 ZNF484Q5JVG2 852 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 TTC12Q9H892 705 aaPredicted RBP12.46□□□□□ -0.41
CPSF7-212ENST00000489728 SETD4Q9NVD3 440 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 GABBR1Q9UBS5 961 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 PPME1Q9Y570 386 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
CPSF7-212ENST00000489728 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 STX6O43752 255 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 OATP04181 439 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 P4HBP07237 508 aaKnown RBP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 CYP2C9P11712 490 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 INSRRP14616 1297 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 FXR2P51116 673 aaKnown RBP eCLIP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 PRKCEQ02156 737 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 TMEM266Q2M3C6 531 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 TRIM71Q2Q1W2 868 aaKnown RBP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
CPSF7-212ENST00000489728 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
CPSF7-212ENST00000489728 CKAP2LQ8IYA6 745 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms