RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MYOGP15173 224 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 ADAM17P78536 824 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 DEFB103AP81534 67 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 GRIK4Q16099 956 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 TCTN1Q2MV58 587 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 SLC17A8Q8NDX2 589 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 PCYT2Q99447 389 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 GAS2L1Q99501 681 aaPredicted RBP11.57□□□□□ -0.56
SF3A3-204ENST00000462258 PRDM12Q9H4Q4 367 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
SF3A3-204ENST00000462258 ABHD14A-ACY1A0A1B0GW23 586 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
SF3A3-204ENST00000462258 EIF5BO60841 1220 aaKnown RBP11.56□□□□□ -0.56
SF3A3-204ENST00000462258 EFCAB14O75071 495 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 CDKL5O76039 1030 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 CCNE2O96020 404 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 NLRP5P59047 1200 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 IGBP1P78318 339 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 SCRN1Q12765 414 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 MYO9BQ13459 2157 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 TAF2Q6P1X5 1199 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 ZNF577Q9BSK1 485 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 TCEAL9Q9UHQ7 104 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 STK36Q9NRP7 1315 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 PRUNE2Q8WUY3 3088 aa11.56□□□□□ -0.56
SF3A3-204ENST00000462258 COL4A6Q14031 1691 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 NLRC5Q86WI3 1866 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 TRANK1O15050 2925 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 MBLAC1A4D2B0 266 aaPredicted RBP11.55□□□□□ -0.56
SF3A3-204ENST00000462258 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 BACH1O14867 736 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 TLL1O43897 1013 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 CIITAP33076 1130 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 STAT5BP51692 787 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 AK2P54819 239 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 IKBKEQ14164 716 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 ANKRD1Q15327 319 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 PRR16Q569H4 304 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 FAM160B1Q5W0V3 765 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 PLPPR4Q7Z2D5 763 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 TMCO2Q7Z6W1 182 aaPredicted RBP11.55□□□□□ -0.56
SF3A3-204ENST00000462258 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
SF3A3-204ENST00000462258 DBF4BQ8NFT6 615 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 LENG9Q96B70 501 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 AIFM3Q96NN9 605 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
SF3A3-204ENST00000462258 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
SF3A3-204ENST00000462258 IGKV6D-21A0A0A0MT36 114 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 RRN3P2A6NIE6 340 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 PFKFB2O60825 505 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 ATG7O95352 703 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 INSRRP14616 1297 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 SLC26A2P50443 739 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 MGAT3Q09327 533 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 FAM26DQ5JW98 314 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 MARCH8Q5T0T0 291 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 ZNF746Q6NUN9 644 aaPredicted RBP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 MIS18BP1Q6P0N0 1132 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 ABHD15Q6UXT9 468 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 RPAINQ86UA6 219 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 RSPH3Q86UC2 560 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 BLIDQ8IZY5 108 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 FAM177A1Q8N128 213 aaPredicted RBP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 DAGLBQ8NCG7 672 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 SEPT8Q92599 483 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
SF3A3-204ENST00000462258 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 ZNF302Q9NR11 478 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
SF3A3-204ENST00000462258 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 ARHGEF15O94989 841 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 GJB5O95377 273 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 AMHP03971 560 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
SF3A3-204ENST00000462258 GHRP10912 638 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 KRT76Q01546 638 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 TAP1Q03518 808 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 ADGRE1Q14246 886 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 NPY5RQ15761 445 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 GALNT17Q6IS24 598 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.53□□□□□ -0.563e-6■■■□□ 16.5
SF3A3-204ENST00000462258 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
SF3A3-204ENST00000462258 MYOCDQ8IZQ8 938 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 TBCKQ8TEA7 893 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 ATP8B4Q8TF62 1192 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 TRAPPC12Q8WVT3 735 aa11.53□□□□□ -0.56
SF3A3-204ENST00000462258 DNAJB3Q8WWF6 145 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms