RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 MARCH8Q5T0T0 291 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 TAF2Q6P1X5 1199 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 RBM23Q86U06 439 aaKnown RBP19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 HOMER1Q86YM7 354 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 CMTR2Q8IYT2 770 aaKnown RBP19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 VN1R2Q8NFZ6 395 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 POF1BQ8WVV4 589 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 PIGSQ96S52 555 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 PHF7Q9BWX1 381 aaPredicted RBP19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 RIOX1Q9H6W3 641 aa19.9■□□□□ 0.78
UBE2D4-209ENST00000454428 MBLAC1A4D2B0 266 aaPredicted RBP19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 FIBPO43427 364 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 STAM2O75886 525 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 SP4Q02446 784 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 IFIT1BQ5T764 474 aaKnown RBP19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 TSHZ1Q6ZSZ6 1077 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 DNAJB3Q8WWF6 145 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 SUSD6Q92537 303 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 CDY2AQ9Y6F7 541 aa19.89■□□□□ 0.77
UBE2D4-209ENST00000454428 PTPRZ1P23471 2315 aaPredicted RBP19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 AVPR2P30518 371 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 CD52P31358 61 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 GATMP50440 423 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 PPP2R3CQ969Q6 453 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 ZBTB10Q96DT7 871 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 RPGRIP1Q96KN7 1286 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 SENP7Q9BQF6 1050 aa19.88■□□□□ 0.77
UBE2D4-209ENST00000454428 RIF1Q5UIP0 2472 aaKnown RBP19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 DNAH14Q0VDD8 3507 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 TCF7P36402 384 aaPredicted RBP19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 MFAP1P55081 439 aaKnown RBP19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 PPFIA1Q13136 1202 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 PAN2Q504Q3 1202 aaKnown RBP19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 CYB5R4Q7L1T6 521 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 ATP8B4Q8TF62 1192 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 RILPL2Q969X0 211 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 UBAC1Q9BSL1 405 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 TUBE1Q9UJT0 475 aa19.87■□□□□ 0.77
UBE2D4-209ENST00000454428 WDR87Q6ZQQ6 2873 aa19.86■□□□□ 0.77
UBE2D4-209ENST00000454428 PDGFBP01127 241 aaPredicted RBP19.86■□□□□ 0.77
UBE2D4-209ENST00000454428 GRIK4Q16099 956 aa19.86■□□□□ 0.77
UBE2D4-209ENST00000454428 NPAS4Q8IUM7 802 aa19.86■□□□□ 0.77
UBE2D4-209ENST00000454428 FNDC1Q4ZHG4 1894 aaPredicted RBP19.86■□□□□ 0.77
UBE2D4-209ENST00000454428 GSTTP1A0A1W2PQM5 241 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 PER2O15055 1255 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 ATP9AO75110 1047 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 ATF7P17544 494 aaPredicted RBP19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 MRPS6P82932 125 aaKnown RBP19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 GRM4Q14833 912 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 CWC27Q6UX04 472 aaKnown RBP19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 ATOH1Q92858 354 aaPredicted RBP19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 KRT23Q9C075 422 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 SENP2Q9HC62 589 aa19.85■□□□□ 0.77
UBE2D4-209ENST00000454428 PNMA6FA0A0J9YX94 578 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 PROB1E7EW31 1015 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 H0Y858 1186 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 KCNA2P16389 499 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 MARK3P27448 753 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 KCNC3Q14003 757 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 PTPN21Q16825 1174 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 PCNX4Q63HM2 1172 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 RSPH3Q86UC2 560 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 DSCC1Q9BVC3 393 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 S1PR5Q9H228 398 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 TMX1Q9H3N1 280 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 TLE6Q9H808 572 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 TLR9Q9NR96 1032 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 FAM186AA6NE01 2351 aa19.84■□□□□ 0.77
UBE2D4-209ENST00000454428 PPFIA3O75145 1194 aa19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 IMMTQ16891 758 aaKnown RBP19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 ASCL5Q7RTU5 278 aa19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 IL25Q9H293 177 aa19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 CNNM2Q9H8M5 875 aa19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 PADI3Q9ULW8 664 aa19.83■□□□□ 0.77
UBE2D4-209ENST00000454428 TRAF1Q13077 416 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 DUSP6Q16828 381 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 USP17L6PQ6QN14 398 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 FTHL17Q9BXU8 183 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 LNPKQ9C0E8 428 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 FAM49AQ9H0Q0 323 aaPredicted RBP19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 ERAP1Q9NZ08 941 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 HCSTQ9UBK5 93 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 SQORQ9Y6N5 450 aa19.82■□□□□ 0.76
UBE2D4-209ENST00000454428 IGSF9BQ9UPX0 1349 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 MEIS2O14770 477 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 SCG2P13521 617 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 ERVFC1P60507 584 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 IGBP1P78318 339 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 FOXK2Q01167 660 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 TMEM62Q0P6H9 643 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 TROAPQ12815 778 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 SEPT1Q8WYJ6 367 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 PCYT2Q99447 389 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 IRF2BPLQ9H1B7 796 aa19.81■□□□□ 0.76
UBE2D4-209ENST00000454428 FSCN2O14926 492 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 GALR2O43603 387 aaPredicted RBP19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 STAG3L1P0CL83 205 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 ITGB5P18084 799 aa19.8■□□□□ 0.76
UBE2D4-209ENST00000454428 HDAC1Q13547 482 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms