RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 C5orf67F2Z3F1 127 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 ICMTO60725 284 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 CXCL10P02778 98 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SUPT20HL2P0C7V6 817 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 ATP4AP20648 1035 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SRSF1Q07955 248 aaKnown RBP eCLIP6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 PICALMQ13492 652 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 ACVR2BQ13705 512 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 COG2Q14746 738 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 NAA30Q147X3 362 aaPredicted RBP6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 CAVIN4Q5BKX8 364 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SAMD5Q5TGI4 173 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 FOXR1Q6PIV2 292 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 EFHBQ8N7U6 833 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 RTP3Q9BQQ7 232 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 KIAA1683Q9H0B3 1180 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 S1PR5Q9H228 398 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SPC25Q9HBM1 224 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 CNNM1Q9NRU3 951 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 HOXC10Q9NYD6 342 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 SEPT3Q9UH03 358 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 ZBTB21Q9ULJ3 1066 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 C2CD3Q4AC94 2353 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 CREBBPQ92793 2442 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 DNAJC25-GNG10A0A024R161 153 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 TMEM8BA6NDV4 472 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 TGFBR3LH3BV60 316 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 FAM117BQ6P1L5 589 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 RIPOR1Q6ZS17 1223 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 FBXO11Q86XK2 927 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 TMEFF1Q8IYR6 380 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 FLCNQ8NFG4 579 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 NETO1Q8TDF5 533 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 ATP8B4Q8TF62 1192 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 ZNF384Q8TF68 577 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 RIN2Q8WYP3 895 aaPredicted RBP6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 GATA6Q92908 595 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 IFT43Q96FT9 208 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 BORCS6Q96GS4 357 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 CFAP53Q96M91 514 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 CTAGE1Q96RT6 745 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 LMAN2LQ9H0V9 348 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 RPAP3Q9H6T3 665 aaPredicted RBP6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 DLGAP2Q9P1A6 1054 aa6.56□□□□□ -1.36
SBDSP1-204ENST00000453858 TRIP12Q14669 1992 aaPredicted RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 GPR75-ASB3A0A0A6YYF3 556 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 SOWAHDA6NJG2 315 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NBNO60934 754 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 ABL1P00519 1130 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 CAPNS1P04632 268 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 LDHBP07195 334 aaKnown RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 FGFR2P21802 821 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 PTGS1P23219 599 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NDUFV1P49821 464 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 FSCN1Q16658 493 aaKnown RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 CNKSR3Q6P9H4 555 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 LMBR1LQ6UX01 489 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 PDZD3Q86UT5 571 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NCAPG2Q86XI2 1143 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 ACER1Q8TDN7 264 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 FGD4Q96M96 766 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 SAP130Q9H0E3 1048 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NUCKS1Q9H1E3 243 aaKnown RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 MFSD1Q9H3U5 465 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 GPAMQ9HCL2 828 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 MBIPQ9NS73 344 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 RXFP3Q9NSD7 469 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 NCDNQ9UBB6 729 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 PI4KBQ9UBF8 816 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 LRFN2Q9ULH4 789 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 BARX2Q9UMQ3 279 aaPredicted RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 DNMT3AQ9Y6K1 912 aaPredicted RBP6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 POLQO75417 2590 aa6.55□□□□□ -1.36
SBDSP1-204ENST00000453858 PPFIA3O75145 1194 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 PDE8BO95263 885 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 GDF11O95390 407 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 DDX58O95786 925 aaKnown RBP6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 RB1P06400 928 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 DNAJB1P25685 340 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 SERPINB4P48594 390 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 LAMC2Q13753 1193 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 TMEM132BQ14DG7 1078 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 LRRFIP1Q32MZ4 808 aaKnown RBP6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 ADGRD2Q7Z7M1 963 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 GLYCTKQ8IVS8 523 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 MAGEB6Q8N7X4 407 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 GLIS3Q8NEA6 775 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 MMP19Q99542 508 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 RUBCNLQ9H714 662 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 ERVK-5Q9HDB9 667 aa6.54□□□□□ -1.36
SBDSP1-204ENST00000453858 ZHX1Q9UKY1 873 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms