RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 KIAA2012Q0VF49 1180 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 KIR3DS1Q14943 382 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 C21orf62-AS1Q17RA5 79 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 BRAPQ7Z569 592 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 ATG4DQ86TL0 474 aaPredicted RBP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 MTDHQ86UE4 582 aaKnown RBP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 SMAP1Q8IYB5 467 aaPredicted RBP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 IFNL3Q8IZI9 196 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 GSTCDQ8NEC7 633 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 SLC7A14Q8TBB6 771 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 ASIC4Q96FT7 647 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 KIRREL1Q96J84 757 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 MARCH2Q9P0N8 246 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 IP6K2Q9UHH9 426 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 RABGAP1Q9Y3P9 1069 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 RWDD3Q9Y3V2 267 aa6.31□□□□□ -1.4
TTC39DP-201ENST00000416781 A0A1W2PQJ5 194 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 TSPAN6O43657 245 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 MSCO60682 206 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 EFEMP2O95967 443 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 MYL3P08590 195 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 TACR1P25103 407 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PSMA3P25788 255 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 BCL6P41182 706 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 GALK1P51570 392 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 GPSM2P81274 684 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 SNX17Q15036 470 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PPP2R5AQ15172 486 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 NFE2Q16621 373 aaPredicted RBP6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 C16orf87Q6PH81 154 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 LBX2Q6XYB7 198 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 NLRX1Q86UT6 975 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 POLR3CQ9BUI4 534 aaPredicted RBP6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 ACSL6Q9UKU0 697 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PLAAQ9Y263 795 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PRRT4C9JH25 899 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 BIN1O00499 593 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 ORC4O43929 436 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 HOXC13P31276 330 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 GUCY1A3Q02108 690 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 MVKQ03426 396 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 LSAMPQ13449 338 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 KIZQ2M2Z5 673 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PPP4R4Q6NUP7 873 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 SIRT2Q8IXJ6 389 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 MYO1HQ8N1T3 1032 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 LZTR1Q8N653 840 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 USP33Q8TEY7 942 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 DPF3Q92784 378 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 CLUHP3Q96NS8 147 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 ALG1Q9BT22 464 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PPCSQ9HAB8 311 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 TRIM39Q9HCM9 518 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 PDLIM7Q9NR12 457 aa6.3□□□□□ -1.4
TTC39DP-201ENST00000416781 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 RFPL3O75679 317 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 CRTAMO95727 393 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 FUCA1P04066 466 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 HNRNPCP07910 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 TPM2P07951 284 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 NBPF7P0C2Y1 421 aaPredicted RBP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 RPL17P18621 184 aaKnown RBP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 FPR2P25090 351 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 ARL4AP40617 200 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 ZNF131P52739 623 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 CCT2P78371 535 aaKnown RBP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 CYP4F8P98187 520 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 TOMM20Q15388 145 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 OTUD6AQ7L8S5 288 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 ARHGEF25Q86VW2 580 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 NLRP10Q86W26 655 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 IQCF2Q8IXL9 164 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 ATRIPQ8WXE1 791 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 NINJ1Q92982 152 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 TMEM169Q96HH4 297 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 HOMER2Q9NSB8 354 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 CLDND1Q9NY35 253 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 PGAP2Q9UHJ9 254 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 EVLQ9UI08 416 aaPredicted RBP6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 PCDHA9Q9Y5H5 950 aa6.29□□□□□ -1.4
TTC39DP-201ENST00000416781 CFAP65Q6ZU64 1925 aaKnown RBP6.28□□□□□ -1.4
TTC39DP-201ENST00000416781 KCNQ2O43526 872 aa6.28□□□□□ -1.4
TTC39DP-201ENST00000416781 HTATSF1O43719 755 aaKnown RBP6.28□□□□□ -1.4
TTC39DP-201ENST00000416781 KIF5CO60282 957 aa6.28□□□□□ -1.4
TTC39DP-201ENST00000416781 RASGRP1O95267 797 aa6.28□□□□□ -1.4
TTC39DP-201ENST00000416781 GRK2P25098 689 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms