RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HIC1Q14526 733 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 PKN1Q16512 942 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 REXO1Q8N1G1 1221 aaKnown RBP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 APBB2Q92870 758 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 C22orf23Q9BZE7 217 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 TBC1D22BQ9NU19 505 aa16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 YBX2Q9Y2T7 364 aaKnown RBP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 TRIP12Q14669 1992 aaPredicted RBP16.56■□□□□ 0.24
NIF3L1-205ENST00000409588 POU3F3P20264 500 aaPredicted RBP16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 RABGGTBP53611 331 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 ANAPC15P60006 121 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 SP4Q02446 784 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 PLEKHG4Q58EX7 1191 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 CRYGNQ8WXF5 182 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 SEPT8Q92599 483 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 RAD9AQ99638 391 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
NIF3L1-205ENST00000409588 MBLAC1A4D2B0 266 aaPredicted RBP16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 CPLX1O14810 134 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 TLL1O43897 1013 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 STAT5BP51692 787 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 USP11P51784 963 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 SSRP1Q08945 709 aaKnown RBP16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 PPFIA1Q13136 1202 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 CYP2W1Q8TAV3 490 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 LMBR1Q8WVP7 490 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 PRDM12Q9H4Q4 367 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 SQORQ9Y6N5 450 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
NIF3L1-205ENST00000409588 CHD9Q3L8U1 2897 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 GJB5O95377 273 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 AMHP03971 560 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 CA3P07451 260 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 ARP10275 920 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 CIITAP33076 1130 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 ACTR2P61160 394 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 MBTPS1Q14703 1052 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 GRIK4Q16099 956 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 JAKMIP3Q5VZ66 844 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 NME8Q8N427 588 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 DBF4BQ8NFT6 615 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 WNT8BQ93098 351 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 PHKBQ93100 1093 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 PDRG1Q9NUG6 133 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 TMEM260Q9NX78 707 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 INSL6Q9Y581 213 aa16.53■□□□□ 0.24
NIF3L1-205ENST00000409588 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 CDH23Q9H251 3354 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 IGKV6D-21A0A0A0MT36 114 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 DLL1O00548 723 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 CDKL5O76039 1030 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 DEXIO95424 95 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 CCT2P78371 535 aaKnown RBP16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 IER5Q5VY09 327 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 FAM160B1Q5W0V3 765 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 SMAP1Q8IYB5 467 aaPredicted RBP16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 USP38Q8NB14 1042 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 PKD2L1Q9P0L9 805 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
NIF3L1-205ENST00000409588 IGLV3-22A0A075B6J6 115 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 FAM86B1E9PN63 330 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 FAM86B2P0C5J1 330 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 INSRRP14616 1297 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 MYOGP15173 224 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 ITGB3BPQ13352 177 aaPredicted RBP16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 ZNF746Q6NUN9 644 aaPredicted RBP16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 MIS18BP1Q6P0N0 1132 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 ABHD15Q6UXT9 468 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 SYMPKQ92797 1274 aaKnown RBP16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 ZNF577Q9BSK1 485 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 LMCD1Q9NZU5 365 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 TELO2Q9Y4R8 837 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
NIF3L1-205ENST00000409588 POTEB3A0JP26 581 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 HBP1O60381 514 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 XBP1P17861 261 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 IGFBP4P22692 258 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 NLRP5P59047 1200 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 KRT76Q01546 638 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 TAP1Q03518 808 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 MARCH8Q5T0T0 291 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 POTEBQ6S5H4 581 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
NIF3L1-205ENST00000409588 PCYT2Q99447 389 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms