RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 DNAJB3Q8WWF6 145 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 PHF7Q9BWX1 381 aaPredicted RBP19.28■□□□□ 0.68
CHMP3-203ENST00000409225 CDY2AQ9Y6F7 541 aa19.28■□□□□ 0.68
CHMP3-203ENST00000409225 KAT6AQ92794 2004 aa19.27■□□□□ 0.68
CHMP3-203ENST00000409225 PALM3A6NDB9 673 aaPredicted RBP19.27■□□□□ 0.68
CHMP3-203ENST00000409225 MARK3P27448 753 aa19.27■□□□□ 0.68
CHMP3-203ENST00000409225 CD52P31358 61 aa19.27■□□□□ 0.68
CHMP3-203ENST00000409225 KRT23Q9C075 422 aa19.27■□□□□ 0.68
CHMP3-203ENST00000409225 AGO3Q9H9G7 860 aaKnown RBP19.27■□□□□ 0.68
CHMP3-203ENST00000409225 TUBE1Q9UJT0 475 aa19.27■□□□□ 0.68
CHMP3-203ENST00000409225 FRMPD4Q14CM0 1322 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 PPFIA3O75145 1194 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 AVPR2P30518 371 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 TRAF1Q13077 416 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 GRIK4Q16099 956 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
CHMP3-203ENST00000409225 CWC27Q6UX04 472 aaKnown RBP19.26■□□□□ 0.67
CHMP3-203ENST00000409225 NPAS4Q8IUM7 802 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 ASIC4Q96FT7 647 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 ZFHX2Q9C0A1 2572 aaPredicted RBP19.26■□□□□ 0.67
CHMP3-203ENST00000409225 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
CHMP3-203ENST00000409225 IBSPP21815 317 aaPredicted RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 TCF7P36402 384 aaPredicted RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 GATMP50440 423 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 MRPS6P82932 125 aaKnown RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 RBM10P98175 930 aaKnown RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 SEC23AQ15436 765 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 RTN4RL1Q86UN2 441 aaPredicted RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 MICAL1Q8TDZ2 1067 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 FAM49AQ9H0Q0 323 aaPredicted RBP19.25■□□□□ 0.67
CHMP3-203ENST00000409225 RIOX1Q9H6W3 641 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 TLE6Q9H808 572 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 CNNM2Q9H8M5 875 aa19.25■□□□□ 0.67
CHMP3-203ENST00000409225 PNMA6FA0A0J9YX94 578 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 PER2O15055 1255 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 IGBP1P78318 339 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 GRM4Q14833 912 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 CRIPAKQ8N1N5 446 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 PIBF1Q8WXW3 757 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 ZBTB10Q96DT7 871 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 SENP7Q9BQF6 1050 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 IRF2BPLQ9H1B7 796 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 CACNA1HO95180 2353 aa19.24■□□□□ 0.67
CHMP3-203ENST00000409225 BAZ2BQ9UIF8 2168 aaKnown RBP19.23■□□□□ 0.67
CHMP3-203ENST00000409225 MBLAC1A4D2B0 266 aaPredicted RBP19.23■□□□□ 0.67
CHMP3-203ENST00000409225 H0Y858 1186 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 STAG3L1P0CL83 205 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 PTPN21Q16825 1174 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 MARCH8Q5T0T0 291 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 NLRX1Q86UT6 975 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 DSCC1Q9BVC3 393 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 FTHL17Q9BXU8 183 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 TLR9Q9NR96 1032 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 DIAPH3Q9NSV4 1193 aa19.23■□□□□ 0.67
CHMP3-203ENST00000409225 CYTH3O43739 400 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 PDGFBP01127 241 aaPredicted RBP19.22■□□□□ 0.67
CHMP3-203ENST00000409225 SCG2P13521 617 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 ATF7P17544 494 aaPredicted RBP19.22■□□□□ 0.67
CHMP3-203ENST00000409225 TMEM62Q0P6H9 643 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 PCNX4Q63HM2 1172 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 ZBTB33Q86T24 672 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 GIMAP8Q8ND71 665 aaPredicted RBP19.22■□□□□ 0.67
CHMP3-203ENST00000409225 VN1R2Q8NFZ6 395 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 SMARCC2Q8TAQ2 1214 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 SUSD6Q92537 303 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 GLG1Q92896 1179 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 ERAP1Q9NZ08 941 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 LRFN2Q9ULH4 789 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 PADI3Q9ULW8 664 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 PLXNA4Q9HCM2 1894 aa19.22■□□□□ 0.67
CHMP3-203ENST00000409225 GSTTP1A0A1W2PQM5 241 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 SP100P23497 879 aaPredicted RBP19.21■□□□□ 0.67
CHMP3-203ENST00000409225 FOXK2Q01167 660 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 SPOUT1Q5T280 376 aaKnown RBP19.21■□□□□ 0.67
CHMP3-203ENST00000409225 USP17L6PQ6QN14 398 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 SEPT1Q8WYJ6 367 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 NEK1Q96PY6 1258 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 PKD2L1Q9P0L9 805 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 TRPV2Q9Y5S1 764 aa19.21■□□□□ 0.67
CHMP3-203ENST00000409225 M0QZ92 97 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 ATP9AO75110 1047 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 PAK2Q13177 524 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 IER5Q5VY09 327 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
CHMP3-203ENST00000409225 ATP8B4Q8TF62 1192 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 CUL5Q93034 780 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 PCDHB12Q9Y5F1 795 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 PLXNA3P51805 1871 aa19.2■□□□□ 0.66
CHMP3-203ENST00000409225 INSRRP14616 1297 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 KCNA2P16389 499 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 DUSP6Q16828 381 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 XRRA1Q6P2D8 792 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 ASCL5Q7RTU5 278 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 RIPOR3Q96MK2 946 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 APOL5Q9BWW9 433 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 SMARCAD1Q9H4L7 1026 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
CHMP3-203ENST00000409225 SQORQ9Y6N5 450 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms