RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 RGL3Q3MIN7 710 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 CYP4F22Q6NT55 531 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 NFXL1Q6ZNB6 911 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 NLGN4XQ8N0W4 816 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 ANKS4BQ8N8V4 417 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 NUP43Q8NFH3 380 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 USP33Q8TEY7 942 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 TEKT5Q96M29 485 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
HMGB1P10-201ENST00000395823 LOC102724159A0A0B4J2E5 919 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 KRIT1O00522 736 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 XPOTO43592 962 aaKnown RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 PRKCAP17252 672 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 CD40P25942 277 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 SDHAP31040 664 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 RBM10P98175 930 aaKnown RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 HLTFQ14527 1009 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 TMEM132BQ14DG7 1078 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 PWP2Q15269 919 aaKnown RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 EPHA7Q15375 998 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 TIGD5Q53EQ6 642 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 GALNT18Q6P9A2 607 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 FRMD7Q6ZUT3 714 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 CLEC4DQ8WXI8 215 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 JADE3Q92613 823 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 TIFAQ96CG3 184 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 HSPBAP1Q96EW2 488 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 PDGFDQ9GZP0 370 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 SMOC1Q9H4F8 434 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 PRDM7Q9NQW5 492 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 BSDC1Q9NW68 430 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 MYOTQ9UBF9 498 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 ASH2LQ9UBL3 628 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 STK17AQ9UEE5 414 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 MSRAQ9UJ68 235 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 ZNF652Q9Y2D9 606 aa6.57□□□□□ -1.36
HMGB1P10-201ENST00000395823 GOLGA6CA6NDK9 693 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 GOLGA6BA6NDN3 693 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 ACOT7O00154 380 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 HGSO14964 777 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 MYL1P05976 194 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 ASGR2P07307 311 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 GOLGA6DP0CG33 693 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 FNTBP49356 437 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 HK2P52789 917 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 SRSF2Q01130 221 aaKnown RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 GALEQ14376 348 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 CXorf67Q86X51 503 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 SYTL4Q96C24 671 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 NUP88Q99567 741 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 ZNF277Q9NRM2 450 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 GOLGA6AQ9NYA3 693 aa6.56□□□□□ -1.36
HMGB1P10-201ENST00000395823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 TCRBV5S2A0A599 114 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 KLHL33A6NCF5 533 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SGSM2O43147 1006 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PSPNO60542 156 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 GDF11O95390 407 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PRNPP04156 253 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 MMEP08473 750 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 ENPP1P22413 925 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 CYP2C19P33261 490 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 GJA4P35212 333 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 THBS2P35442 1172 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 MANFP55145 182 aaKnown RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 ERVFC1P60507 584 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 CLUL1Q15846 466 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SLC14A2Q15849 920 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SYCP2LQ5T4T6 812 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 EFCAB2Q5VUJ9 269 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 BTBD8Q5XKL5 378 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SLC4A10Q6U841 1118 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 EP400NLQ6ZTU2 488 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 RTN4RL1Q86UN2 441 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 NLRX1Q86UT6 975 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 AMOTL1Q8IY63 956 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 ZZZ3Q8IYH5 903 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 STK11IPQ8N1F8 1099 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PDZD8Q8NEN9 1154 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 FOXRED1Q96CU9 486 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SHISA4Q96DD7 197 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 LRGUKQ96M69 825 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 AIFM3Q96NN9 605 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 RPS6KC1Q96S38 1066 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PSMD1Q99460 953 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 SPOCK3Q9BQ16 436 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PRDM12Q9H4Q4 367 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 RC3H2Q9HBD1 1191 aaKnown RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 RXFP1Q9HBX9 757 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 RIC8BQ9NVN3 520 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 DDX20Q9UHI6 824 aaKnown RBP6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PALD1Q9ULE6 856 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 INVSQ9Y283 1065 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 PPP2R3BQ9Y5P8 575 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 MRFAP1Q9Y605 127 aa6.55□□□□□ -1.36
HMGB1P10-201ENST00000395823 FOXP2O15409 715 aa6.54□□□□□ -1.36
HMGB1P10-201ENST00000395823 MED26O95402 600 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms