RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 IGBP1P78318 339 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 SETQ01105 290 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-205ENST00000395794 STK3Q13188 491 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 GRIK4Q16099 956 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 TRAF7Q6Q0C0 670 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 VPS54Q9P1Q0 977 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 TUBE1Q9UJT0 475 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 FAM86B1E9PN63 330 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
CXCL12-205ENST00000395794 IPO5O00410 1097 aaKnown RBP15.62■□□□□ 0.09
CXCL12-205ENST00000395794 BACH1O14867 736 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 DEXIO95424 95 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 FAM86B2P0C5J1 330 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 SLC26A2P50443 739 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 ANAPC15P60006 121 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 ADAM17P78536 824 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 ITGB3BPQ13352 177 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-205ENST00000395794 MBTPS1Q14703 1052 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 FAM160B1Q5W0V3 765 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 PLPPR4Q7Z2D5 763 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 LARP6Q9BRS8 491 aaKnown RBP15.62■□□□□ 0.09
CXCL12-205ENST00000395794 ZNF577Q9BSK1 485 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 TBC1D22BQ9NU19 505 aa15.62■□□□□ 0.09
CXCL12-205ENST00000395794 SCN5AQ14524 2016 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 INSRRP14616 1297 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 DEFB103AP81534 67 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 ANKRD1Q15327 319 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 PRR16Q569H4 304 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 PLEKHG4Q58EX7 1191 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 MIS18BP1Q6P0N0 1132 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 RPAINQ86UA6 219 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 PPM1EQ8WY54 764 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 APBB2Q92870 758 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 RAD9AQ99638 391 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 C22orf23Q9BZE7 217 aa15.61■□□□□ 0.09
CXCL12-205ENST00000395794 SLKQ9H2G2 1235 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-205ENST00000395794 POTEB3A0JP26 581 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 M0QZ92 97 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 DLL1O00548 723 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-205ENST00000395794 GJB5O95377 273 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 FAM26DQ5JW98 314 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 POTEBQ6S5H4 581 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 FAM177A1Q8N128 213 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-205ENST00000395794 RASGRP4Q8TDF6 673 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 CRYGNQ8WXF5 182 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 PCYT2Q99447 389 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 PCDHA4Q9UN74 947 aa15.6■□□□□ 0.09
CXCL12-205ENST00000395794 IGLV3-22A0A075B6J6 115 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 MBLAC1A4D2B0 266 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-205ENST00000395794 ATG7O95352 703 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 XBP1P17861 261 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 USP11P51784 963 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 KRT76Q01546 638 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 TAP1Q03518 808 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 PLCB4Q15147 1175 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 IER5Q5VY09 327 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 GALNT17Q6IS24 598 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 FAM117BQ6P1L5 589 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 PDXDC2PQ6P474 469 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 RUFY4Q6ZNE9 571 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 TMCO2Q7Z6W1 182 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-205ENST00000395794 CKAP2LQ8IYA6 745 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 SMAP1Q8IYB5 467 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-205ENST00000395794 MYOCDQ8IZQ8 938 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 DNAJB3Q8WWF6 145 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 ARNTL2Q8WYA1 636 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 IFIH1Q9BYX4 1025 aaKnown RBP15.59■□□□□ 0.09
CXCL12-205ENST00000395794 FAM49AQ9H0Q0 323 aaPredicted RBP15.59■□□□□ 0.09
CXCL12-205ENST00000395794 CERS4Q9HA82 394 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 ZNF302Q9NR11 478 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 SAMM50Q9Y512 469 aa15.59■□□□□ 0.09
CXCL12-205ENST00000395794 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.09
CXCL12-205ENST00000395794 CCNE2O96020 404 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 PSAPP07602 524 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 CIITAP33076 1130 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 ADGRE1Q14246 886 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 TCTN1Q2MV58 587 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 MARCH8Q5T0T0 291 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 ZNF746Q6NUN9 644 aaPredicted RBP15.58■□□□□ 0.08
CXCL12-205ENST00000395794 SWSAP1Q6NVH7 229 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 ABHD15Q6UXT9 468 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.58■□□□□ 0.08
CXCL12-205ENST00000395794 BLIDQ8IZY5 108 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 UIMC1Q96RL1 719 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
CXCL12-205ENST00000395794 INSL6Q9Y581 213 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 PCDHA2Q9Y5H9 948 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 DOCK5Q9H7D0 1870 aa15.58■□□□□ 0.08
CXCL12-205ENST00000395794 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 DHX15O43143 795 aaKnown RBP15.57■□□□□ 0.08
CXCL12-205ENST00000395794 HBP1O60381 514 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 CHRNA1P02708 482 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 GHRP10912 638 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 MRPS6P82932 125 aaKnown RBP15.57■□□□□ 0.08
CXCL12-205ENST00000395794 CCDC85BQ15834 202 aaPredicted RBP15.57■□□□□ 0.08
CXCL12-205ENST00000395794 MICALL1Q8N3F8 863 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 ATP8B4Q8TF62 1192 aa15.57■□□□□ 0.08
CXCL12-205ENST00000395794 PCDHA10Q9Y5I2 948 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms