RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 PACS2Q86VP3 889 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 RNPC3Q96LT9 517 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 TRIM10Q9UDY6 481 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 AMACRQ9UHK6 382 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 TCP11X1B4DZS4 312 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 MFAP3P55082 362 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 FMR1Q06787 632 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 KRT81Q14533 505 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■■■■■ 69
SPOCK1-202ENST00000394945 XPO6Q96QU8 1125 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 TRIM56Q9BRZ2 755 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 PAIP2BQ9ULR5 123 aaKnown RBP16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 SCYL2Q6P3W7 929 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 TRPM8Q7Z2W7 1104 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 RHOT2Q8IXI1 618 aa16.76■□□□□ 0.27
SPOCK1-202ENST00000394945 CCT8L1PA6NM43 557 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 DNAJC6O75061 913 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 AOC3Q16853 763 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 ODR4Q5SWX8 454 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 JADE1Q6IE81 842 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 SYNGAP1Q96PV0 1343 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 CFAP69A5D8W1 941 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 MIF4GDA9UHW6 222 aaKnown RBP16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 CTSWP56202 376 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 NR1H3Q13133 447 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 NR1I3Q14994 352 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 ATG16L1Q676U5 607 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 STAG2Q8N3U4 1231 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PYROXD1Q8WU10 500 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 NT5C1BQ96P26 610 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 SMYD3Q9H7B4 428 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 KIF9Q9HAQ2 790 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 G3BP2Q9UN86 482 aaKnown RBP16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PCDH11XQ9BZA7 1347 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PCDH11YQ9BZA8 1340 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 STAM2O75886 525 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 SAT1P21673 171 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 SCP2P22307 547 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 TEX9Q8N6V9 391 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 TBCKQ8TEA7 893 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 USP15Q9Y4E8 981 aaPredicted RBP16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 CIAO1O76071 339 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PDE8BO95263 885 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PCYT1AP49585 367 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 CENPUQ71F23 418 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 PIK3R5Q8WYR1 880 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 SAYSD1Q9NPB0 183 aa16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 ADD3Q9UEY8 706 aaKnown RBP16.75■□□□□ 0.27
SPOCK1-202ENST00000394945 CHN1P15882 459 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 EPHB1P54762 984 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 BPIFB4P59827 614 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 TMPRSS15P98073 1019 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 C16orf87Q6PH81 154 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 MPHOSPH6Q99547 160 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 PRMT1Q99873 361 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 TUBE1Q9UJT0 475 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 GARSP41250 739 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 CRLF3Q8IUI8 442 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 NOC2LQ9Y3T9 749 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 TTLL3Q9Y4R7 772 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 KIF28PB7ZC32 967 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 IPO5O00410 1097 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 KRT19P08727 400 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 LRIG3Q6UXM1 1119 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 DNAJC10Q8IXB1 793 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 PDIK1LQ8N165 341 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 OR2W6PQ8NHA6 318 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 TRPC6Q9Y210 931 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 FRMPD2Q68DX3 1309 aaPredicted RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 TSPOAP1O95153 1857 aa16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 ZCCHC11Q5TAX3 1644 aaKnown RBP16.74■□□□□ 0.27
SPOCK1-202ENST00000394945 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 ARFIP2P53365 341 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 ZNF211Q13398 564 aaPredicted RBP16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 ART3Q13508 389 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 RGS9BPQ6ZS82 235 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 KIF2BQ8N4N8 673 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 DTX3LQ8TDB6 740 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 DNAJC9Q8WXX5 260 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 MS4A14Q96JA4 679 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 DLGAP2Q9P1A6 1054 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 GOLGA8QA0A0J9YX86 632 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 GOLGA8OA6NCC3 632 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 GOLGA8NF8WBI6 632 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 PRKAB2O43741 272 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 KCNA3P22001 575 aa16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
SPOCK1-202ENST00000394945 ANO5Q75V66 913 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms