RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 DDX25Q9UHL0 483 aaKnown RBP21.27■□□□□ 0.99
SHANK1-203ENST00000391813 NOD1Q9Y239 953 aa21.27■□□□□ 0.99
SHANK1-203ENST00000391813 MGEA5O60502 916 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 ADD2P35612 726 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 MDH1P40925 334 aaKnown RBP21.26■□□□□ 0.99
SHANK1-203ENST00000391813 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
SHANK1-203ENST00000391813 GNPTABQ3T906 1256 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 CDKL2Q92772 493 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 DBNDD1Q9H9R9 158 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 SCINQ9Y6U3 715 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 MIF4GDA9UHW6 222 aaKnown RBP21.26■□□□□ 0.99
SHANK1-203ENST00000391813 HARSP12081 509 aaKnown RBP21.26■□□□□ 0.99
SHANK1-203ENST00000391813 MSH2P43246 934 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 SLC12A2P55011 1212 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 ICA1Q05084 483 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 AIFM3Q96NN9 605 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 DISC1Q9NRI5 854 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 PSMC2P35998 433 aaKnown RBP21.26■□□□□ 0.99
SHANK1-203ENST00000391813 PPP1R2P3Q6NXS1 205 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 RHOT2Q8IXI1 618 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
SHANK1-203ENST00000391813 NOP56O00567 594 aaKnown RBP21.25■□□□□ 0.99
SHANK1-203ENST00000391813 PALMO75781 387 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 GDAP1Q8TB36 358 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 FGGP02679 453 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 PPP4R3CPQ6ZMV5 832 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 SYT2Q8N9I0 419 aaPredicted RBP21.25■□□□□ 0.99
SHANK1-203ENST00000391813 SDR42E1Q8WUS8 393 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 GJA10Q969M2 543 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 GRAMD1AQ96CP6 724 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 SPC25Q9HBM1 224 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 EN1Q05925 392 aaPredicted RBP21.25■□□□□ 0.99
SHANK1-203ENST00000391813 ASPHQ12797 758 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 CCT8L2Q96SF2 557 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 PRDM4Q9UKN5 801 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 KCNQ2O43526 872 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 MT-ND3P03897 115 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 TNNI1P19237 187 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 IRAK1P51617 712 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 MFAP3P55082 362 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 YWHAGP61981 247 aaKnown RBP eCLIP21.25■□□□□ 0.99
SHANK1-203ENST00000391813 RASGRP2Q7LDG7 609 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 BRIP1Q9BX63 1249 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 PFDN4Q9NQP4 134 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 PKD2L1Q9P0L9 805 aa21.25■□□□□ 0.99
SHANK1-203ENST00000391813 DAPK3O43293 454 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 GAS7O60861 476 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 GCFC2P16383 781 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 POLR2BP30876 1174 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 MYL7Q01449 175 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 TMED1Q13445 227 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 MAEAQ7L5Y9 396 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 DTNBP1Q96EV8 351 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 IPO5O00410 1097 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PLA2G4AP47712 749 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 HLFQ16534 295 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 ABCB5Q2M3G0 1257 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 GYG2O15488 501 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 TEX33O43247 280 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 GAP43P17677 238 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PHEXP78562 749 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PTPN12Q05209 780 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 RPS6KA2Q15349 733 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 CCNI2Q6ZMN8 369 aaPredicted RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 ZNF473Q8WTR7 871 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 CALR3Q96L12 384 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 CEP72Q9P209 647 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 TRPC6Q9Y210 931 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 TTC26A0AVF1 554 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PTK2Q05397 1052 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 MKRN3Q13064 507 aaKnown RBP21.24■□□□□ 0.99
SHANK1-203ENST00000391813 PODNQ7Z5L7 613 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 ZNF653Q96CK0 615 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 OLFM3Q96PB7 478 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 SLITRK6Q9H5Y7 841 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 TBK1Q9UHD2 729 aa21.24■□□□□ 0.99
SHANK1-203ENST00000391813 SYNGAP1Q96PV0 1343 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 ADORA1P30542 326 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 MRPS25P82663 173 aaKnown RBP21.23■□□□□ 0.99
SHANK1-203ENST00000391813 ADCY1Q08828 1119 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 FAM186BQ8IYM0 893 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 PACSIN2Q9UNF0 486 aaPredicted RBP21.23■□□□□ 0.99
SHANK1-203ENST00000391813 MRPL11Q9Y3B7 192 aaKnown RBP21.23■□□□□ 0.99
SHANK1-203ENST00000391813 SPAG7O75391 227 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 STAMBPL1Q96FJ0 436 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 FAM81BQ96LP2 452 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 LRRC37BQ96QE4 947 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 TRIM55Q9BYV6 548 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 MAPK4P31152 587 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 GARSP41250 739 aaKnown RBP21.23■□□□□ 0.99
SHANK1-203ENST00000391813 IFT122Q9HBG6 1241 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 ZSWIM5Q9P217 1185 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 GUCY1A3Q02108 690 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 NXNQ6DKJ4 435 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 CDAN1Q8IWY9 1227 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 ETNK1Q9HBU6 452 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.23■□□□□ 0.99
SHANK1-203ENST00000391813 KIAA1024Q9UPX6 916 aa21.23■□□□□ 0.99
SHANK1-203ENST00000391813 GDAQ9Y2T3 454 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms