RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 PPIL2Q13356 520 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 SLC35F6Q8N357 371 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 P2RX7Q99572 595 aaKnown RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 TTYH3Q9C0H2 523 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 ZHX3Q9H4I2 956 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 GUCA1BQ9UMX6 200 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 A0A1W2PQJ5 194 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 POTEFA5A3E0 1075 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 MANSC4A6NHS7 340 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 MED24O75448 989 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 H2AFXP16104 143 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 SPP2Q13103 211 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 TUBB2AQ13885 445 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 MEA1Q16626 185 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 FIGNQ5HY92 759 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 POTEGQ6S5H5 508 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 POTEEQ6S8J3 1075 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 TUBB2BQ9BVA1 445 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 DDX41Q9UJV9 622 aaKnown RBP13.38□□□□□ -0.27
HMGCL-202ENST00000374487 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 MYH7BA7E2Y1 1941 aa13.38□□□□□ -0.27
HMGCL-202ENST00000374487 ABCB11O95342 1321 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 ABL1P00519 1130 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 ERCC3P19447 782 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 ARHGAP25P42331 645 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 TEX35Q5T0J7 233 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 FOXR2Q6PJQ5 311 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 KIAA1328Q86T90 577 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CATSPER3Q86XQ3 398 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CCDC170Q8IYT3 715 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 ACER1Q8TDN7 264 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 NAPGQ99747 312 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 FAM207AQ9NSI2 230 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 ZBTB21Q9ULJ3 1066 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 TMX2Q9Y320 296 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CFBP00751 764 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CYP11B2P19099 503 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 GTF2A2P52657 109 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CAP1Q01518 475 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CCDC40Q4G0X9 1142 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 CEP112Q8N8E3 955 aa13.37□□□□□ -0.27
HMGCL-202ENST00000374487 REXO2Q9Y3B8 237 aaKnown RBP13.37□□□□□ -0.27
HMGCL-202ENST00000374487 MEIS1O00470 390 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 RPA1P27694 616 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 SPIRE1Q08AE8 756 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 CRHR2Q13324 411 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 SNAPC2Q13487 334 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 ZYXQ15942 572 aaKnown RBP13.36□□□□□ -0.27
HMGCL-202ENST00000374487 CCDC122Q5T0U0 273 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 TREML2Q5T2D2 321 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 GPAT2Q6NUI2 795 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
HMGCL-202ENST00000374487 LRRC55Q6ZSA7 311 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 NELFCDQ8IXH7 590 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 CHURC1Q8WUH1 139 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 LENG9Q96B70 501 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 CCDC42Q96M95 316 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 ZSWIM4Q9H7M6 989 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 EMILIN3Q9NT22 766 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 KCNH4Q9UQ05 1017 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
HMGCL-202ENST00000374487 PIK3CDO00329 1044 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 OPLAHO14841 1288 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 MSH4O15457 936 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 KRT86O43790 486 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CIITAP33076 1130 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CLCN6P51797 869 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 HMGCS2P54868 508 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 SLC12A3P55017 1021 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 CHMP4BP1P59074 171 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 PABPC4Q13310 644 aaKnown RBP eCLIP13.35□□□□□ -0.273e-6■■■□□ 15.2
HMGCL-202ENST00000374487 DOCK1Q14185 1865 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
HMGCL-202ENST00000374487 GADL1Q6ZQY3 521 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms