RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 MSRAQ9UJ68 235 aa31.33■■■□□ 2.61
ATPAF1-201ENST00000329231 ATP2A2P16615 1042 aaKnown RBP31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 SLC26A2P50443 739 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 FAM160B1Q5W0V3 765 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 MIS18BP1Q6P0N0 1132 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 TAF2Q6P1X5 1199 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 ABHD15Q6UXT9 468 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 KRT25Q7Z3Z0 450 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 LENG9Q96B70 501 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 UIMC1Q96RL1 719 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 TTYH1Q9H313 450 aaPredicted RBP31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 TRPC6Q9Y210 931 aa31.32■■■□□ 2.6
ATPAF1-201ENST00000329231 IGKV6D-21A0A0A0MT36 114 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 RRN3P2A6NIE6 340 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 BACH1O14867 736 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 EDIL3O43854 480 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 PBX2P40425 430 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 NONOQ15233 471 aaKnown RBP eCLIP31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 ZNF746Q6NUN9 644 aaPredicted RBP31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 CNKSR3Q6P9H4 555 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 TUBE1Q9UJT0 475 aa31.31■■■□□ 2.6
ATPAF1-201ENST00000329231 INSRRP14616 1297 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 KRT76Q01546 638 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 PLCB4Q15147 1175 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 SMAP1Q8IYB5 467 aaPredicted RBP31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 GUCD1Q96NT3 240 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 SLC9A7Q96T83 725 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 LIMCH1Q9UPQ0 1083 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 STXBP5LQ9Y2K9 1186 aa31.3■■■□□ 2.6
ATPAF1-201ENST00000329231 MBLAC1A4D2B0 266 aaPredicted RBP31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 DTNBO60941 627 aa31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 MBTPS1Q14703 1052 aa31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 NSUN7Q8NE18 718 aaKnown RBP31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 PHOSPHO2Q8TCD6 241 aa31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 KAT6AQ92794 2004 aa31.29■■■□□ 2.6
ATPAF1-201ENST00000329231 CYP3A7-CYP3A51PA0A087WV96 503 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 CCDC194A0A1B0GVG4 234 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 POTEB3A0JP26 581 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 MSH4O15457 936 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 FDPSP14324 419 aaKnown RBP31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 CYP3A7P24462 503 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 KCNJ6P48051 423 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 IGBP1P78318 339 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 Q4G0T1 1027 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 POTEBQ6S5H4 581 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 RPAINQ86UA6 219 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 RSPH3Q86UC2 560 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 ZNF576Q9H609 170 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 ZNF302Q9NR11 478 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 TET1Q8NFU7 2136 aa31.28■■■□□ 2.6
ATPAF1-201ENST00000329231 EFCAB14O75071 495 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 CTSHP09668 335 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 MARCH8Q5T0T0 291 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 SWSAP1Q6NVH7 229 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 MOXD1Q6UVY6 613 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 CCDC60Q8IWA6 550 aaPredicted RBP31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 RIT2Q99578 217 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 GJB4Q9NTQ9 266 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 PCDHA11Q9Y5I1 949 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 PCDHA10Q9Y5I2 948 aa31.27■■■□□ 2.6
ATPAF1-201ENST00000329231 ABHD14A-ACY1A0A1B0GW23 586 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 RPLP2P05387 115 aaKnown RBP31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 PSAPP07602 524 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 IKBKEQ14164 716 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 INF2Q27J81 1249 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 PDXDC2PQ6P474 469 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 RUFY4Q6ZNE9 571 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 CDX2Q99626 313 aaPredicted RBP31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 KIF2CQ99661 725 aa31.26■■■□□ 2.59
ATPAF1-201ENST00000329231 GAS7O60861 476 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 RBM25P49756 843 aaKnown RBP31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 RABGGTBP53611 331 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 FAM26DQ5JW98 314 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 ATP8B4Q8TF62 1192 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 SLC5A5Q92911 643 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 BRMS1Q9HCU9 246 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 SAMM50Q9Y512 469 aa31.25■■■□□ 2.59
ATPAF1-201ENST00000329231 WDR64B1ANS9 1081 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 HBP1O60381 514 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 TDP2O95551 362 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 WDR5P61964 334 aaKnown RBP31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 LRCH2Q5VUJ6 765 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 MBOAT7Q96N66 472 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 TEKT3Q9BXF9 490 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 NKX2-4Q9H2Z4 354 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 SLC28A3Q9HAS3 691 aa31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 YBX2Q9Y2T7 364 aaKnown RBP31.24■■■□□ 2.59
ATPAF1-201ENST00000329231 JAK2O60674 1132 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 PLEKHG4Q58EX7 1191 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 CKAP2LQ8IYA6 745 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 DBF4BQ8NFT6 615 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 OXER1Q8TDS5 423 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 DNAJB3Q8WWF6 145 aa31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 ZSCAN31Q96LW9 406 aaPredicted RBP31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 UPF2Q9HAU5 1272 aaKnown RBP31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 MAFBQ9Y5Q3 323 aaPredicted RBP31.23■■■□□ 2.59
ATPAF1-201ENST00000329231 KIF28PB7ZC32 967 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 KRT2P35908 639 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 TCTN1Q2MV58 587 aa31.22■■■□□ 2.59
ATPAF1-201ENST00000329231 LETM2Q2VYF4 491 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms