RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W CDC31P06704 161 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W HIS5P07172 385 aa3.47□□□□□ -1.85
MSD1YPL104W YKR104WP0CE69 306 aa3.47□□□□□ -1.85
MSD1YPL104W RAP1P11938 827 aa3.47□□□□□ -1.85
MSD1YPL104W POL30P15873 258 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W SGV1P23293 657 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W HXT4P32467 576 aa3.47□□□□□ -1.85
MSD1YPL104W RPD3P32561 433 aa3.47□□□□□ -1.85
MSD1YPL104W CDC5P32562 705 aa3.47□□□□□ -1.85
MSD1YPL104W ATO2P32907 282 aa3.47□□□□□ -1.85
MSD1YPL104W SKG1P36169 355 aa3.47□□□□□ -1.85
MSD1YPL104W SHM2P37291 469 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W YHR218WP38899 603 aa3.47□□□□□ -1.85
MSD1YPL104W CCT6P39079 546 aa3.47□□□□□ -1.85
MSD1YPL104W GIM4P40005 111 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W GAB1P41733 394 aa3.47□□□□□ -1.85
MSD1YPL104W BIR1P47134 954 aa3.47□□□□□ -1.85
MSD1YPL104W SRB7P47822 140 aa3.47□□□□□ -1.85
MSD1YPL104W KEL2P50090 882 aa3.47□□□□□ -1.85
MSD1YPL104W RMR1P53060 241 aa3.47□□□□□ -1.85
MSD1YPL104W TDA7P53882 636 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W YNL140CP53910 189 aa3.47□□□□□ -1.85
MSD1YPL104W AQR1P53943 586 aa3.47□□□□□ -1.85
MSD1YPL104W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
MSD1YPL104W AAT1Q01802 451 aa3.47□□□□□ -1.85
MSD1YPL104W HLR1Q04429 423 aa3.47□□□□□ -1.85
MSD1YPL104W ARG7Q04728 441 aa3.47□□□□□ -1.85
MSD1YPL104W YMR034CQ05131 434 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W ATG10Q07879 167 aa3.47□□□□□ -1.85
MSD1YPL104W NSE1Q07913 336 aa3.47□□□□□ -1.85
MSD1YPL104W XYL2Q07993 356 aa3.47□□□□□ -1.85
MSD1YPL104W TRM8Q12009 286 aa3.47□□□□□ -1.85
MSD1YPL104W RPN5Q12250 445 aaKnown RBP3.47□□□□□ -1.85
MSD1YPL104W BRR1Q99177 341 aaPredicted RBP3.47□□□□□ -1.85
MSD1YPL104W CET1O13297 549 aaPredicted RBP3.46□□□□□ -1.86
MSD1YPL104W SUI3P09064 285 aaKnown RBP3.46□□□□□ -1.86
MSD1YPL104W SNF4P12904 322 aa3.46□□□□□ -1.86
MSD1YPL104W ATR1P13090 542 aa3.46□□□□□ -1.86
MSD1YPL104W FBA1P14540 359 aaKnown RBP3.46□□□□□ -1.86
MSD1YPL104W MRPS28P21771 286 aa3.46□□□□□ -1.86
MSD1YPL104W PEX3P28795 441 aa3.46□□□□□ -1.86
MSD1YPL104W SEC17P32602 292 aa3.46□□□□□ -1.86
MSD1YPL104W YME2P32843 850 aa3.46□□□□□ -1.86
MSD1YPL104W DEF1P35732 738 aaKnown RBP3.46□□□□□ -1.86
MSD1YPL104W VPS21P36017 210 aaKnown RBP3.46□□□□□ -1.86
MSD1YPL104W CCZ1P38273 704 aa3.46□□□□□ -1.86
MSD1YPL104W YEL073CP39974 107 aa3.46□□□□□ -1.86
MSD1YPL104W PDS1P40316 373 aaPredicted RBP3.46□□□□□ -1.86
MSD1YPL104W RIC1P40395 1056 aa3.46□□□□□ -1.86
MSD1YPL104W CAB2P40506 365 aa3.46□□□□□ -1.86
MSD1YPL104W AIM22P47051 409 aa3.46□□□□□ -1.86
MSD1YPL104W MRK1P50873 501 aa3.46□□□□□ -1.86
MSD1YPL104W YKR011CQ02209 353 aa3.46□□□□□ -1.86
MSD1YPL104W SPO19Q03029 223 aa3.46□□□□□ -1.86
MSD1YPL104W PEX12Q04370 399 aa3.46□□□□□ -1.86
MSD1YPL104W YLL007CQ07799 665 aa3.46□□□□□ -1.86
MSD1YPL104W NGL1Q08213 363 aaKnown RBP3.46□□□□□ -1.86
MSD1YPL104W VPS68Q12016 184 aa3.46□□□□□ -1.86
MSD1YPL104W MLH3Q12083 715 aa3.46□□□□□ -1.86
MSD1YPL104W HAL9Q12180 1030 aa3.46□□□□□ -1.86
MSD1YPL104W YOR342CQ12182 319 aa3.46□□□□□ -1.86
MSD1YPL104W RGT2Q12300 763 aa3.46□□□□□ -1.86
MSD1YPL104W SNF8Q12483 233 aa3.46□□□□□ -1.86
MSD1YPL104W MHT1Q12525 324 aa3.46□□□□□ -1.86
MSD1YPL104W YDR034W-BQ6Q5X2 51 aa3.46□□□□□ -1.86
MSD1YPL104W RAD7P06779 565 aa3.45□□□□□ -1.86
MSD1YPL104W DAP2P18962 818 aa3.45□□□□□ -1.86
MSD1YPL104W MSB1P21339 1137 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W CMK2P22517 447 aa3.45□□□□□ -1.86
MSD1YPL104W DMC1P25453 334 aa3.45□□□□□ -1.86
MSD1YPL104W PPZ1P26570 692 aa3.45□□□□□ -1.86
MSD1YPL104W COS111P38308 924 aa3.45□□□□□ -1.86
MSD1YPL104W YHL012WP38709 493 aa3.45□□□□□ -1.86
MSD1YPL104W YPT35P38815 214 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W TDA11P38854 504 aa3.45□□□□□ -1.86
MSD1YPL104W ATG7P38862 630 aa3.45□□□□□ -1.86
MSD1YPL104W MTW1P39731 289 aa3.45□□□□□ -1.86
MSD1YPL104W VHR1P40522 640 aa3.45□□□□□ -1.86
MSD1YPL104W AGP3P43548 558 aa3.45□□□□□ -1.86
MSD1YPL104W COQ5P49017 307 aa3.45□□□□□ -1.86
MSD1YPL104W TOM22P49334 152 aa3.45□□□□□ -1.86
MSD1YPL104W COS12P53053 380 aa3.45□□□□□ -1.86
MSD1YPL104W YNR061CP53747 219 aa3.45□□□□□ -1.86
MSD1YPL104W YNR068CP53754 272 aa3.45□□□□□ -1.86
MSD1YPL104W YMR226CQ05016 267 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W SSQ1Q05931 657 aaPredicted RBP3.45□□□□□ -1.86
MSD1YPL104W GPI11Q06636 219 aa3.45□□□□□ -1.86
MSD1YPL104W DAP1Q12091 152 aa3.45□□□□□ -1.86
MSD1YPL104W NMD4Q12129 218 aa3.45□□□□□ -1.86
MSD1YPL104W PFK27Q12471 397 aaPredicted RBP3.45□□□□□ -1.86
MSD1YPL104W TY2A-LR1P0C2J4 438 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-FP0CX61 438 aa3.45□□□□□ -1.86
MSD1YPL104W TY2A-GR2P0CX62 438 aa3.45□□□□□ -1.86
MSD1YPL104W UNG1P12887 359 aa3.45□□□□□ -1.86
MSD1YPL104W YAP1P19880 650 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W TY2A-CP25383 438 aa3.45□□□□□ -1.86
MSD1YPL104W MGM101P32787 269 aaKnown RBP3.45□□□□□ -1.86
MSD1YPL104W SPO23P33757 523 aa3.45□□□□□ -1.86
MSD1YPL104W SPC34P36131 295 aa3.45□□□□□ -1.86
MSD1YPL104W AXL2P38928 823 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms