RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RIP1P08067 215 aa3.68□□□□□ -1.82
USA1YML029W MSS116P15424 664 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W YCL049CP25577 312 aa3.68□□□□□ -1.82
USA1YML029W SYP1P25623 870 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W SSO1P32867 290 aa3.68□□□□□ -1.82
USA1YML029W ATO2P32907 282 aa3.68□□□□□ -1.82
USA1YML029W MRPL17P36528 281 aa3.68□□□□□ -1.82
USA1YML029W MNN2P38069 597 aa3.68□□□□□ -1.82
USA1YML029W EHT1P38295 451 aa3.68□□□□□ -1.82
USA1YML029W MNL1P38888 796 aa3.68□□□□□ -1.82
USA1YML029W YIL086CP40503 102 aa3.68□□□□□ -1.82
USA1YML029W DIM1P41819 318 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W UPF3P48412 387 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W RAD17P48581 401 aa3.68□□□□□ -1.82
USA1YML029W ERP6P53198 216 aa3.68□□□□□ -1.82
USA1YML029W YNL165WP53891 406 aa3.68□□□□□ -1.82
USA1YML029W ATP25Q03153 612 aa3.68□□□□□ -1.82
USA1YML029W RCF1Q03713 159 aa3.68□□□□□ -1.82
USA1YML029W HFD1Q04458 532 aa3.68□□□□□ -1.82
USA1YML029W GAD1Q04792 585 aa3.68□□□□□ -1.82
USA1YML029W YHC1Q05900 231 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W YPR172WQ06608 200 aa3.68□□□□□ -1.82
USA1YML029W GIC2Q06648 383 aa3.68□□□□□ -1.82
USA1YML029W ASA1Q06822 443 aa3.68□□□□□ -1.82
USA1YML029W MFG1Q07684 458 aa3.68□□□□□ -1.82
USA1YML029W YPR022CQ12139 1133 aa3.68□□□□□ -1.82
USA1YML029W ADF1Q2V2Q1 113 aa3.68□□□□□ -1.82
USA1YML029W SLH1P53327 1967 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W RAS2P01120 322 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W LEU4P06208 619 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W HEM13P11353 328 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W CDC26P14724 124 aa3.68□□□□□ -1.82
USA1YML029W STE4P18851 423 aa3.68□□□□□ -1.82
USA1YML029W MSN1P22148 382 aa3.68□□□□□ -1.82
USA1YML029W NPR1P22211 790 aa3.68□□□□□ -1.82
USA1YML029W NAR1P23503 491 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W NAB2P32505 525 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
USA1YML029W YKR078WP36158 585 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W YBR241CP38142 488 aa3.68□□□□□ -1.82
USA1YML029W ATG7P38862 630 aa3.68□□□□□ -1.82
USA1YML029W MET30P39014 640 aa3.68□□□□□ -1.82
USA1YML029W PLB1P39105 664 aa3.68□□□□□ -1.82
USA1YML029W TPA1P40032 644 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W NTA1P40354 457 aa3.68□□□□□ -1.82
USA1YML029W NEO1P40527 1151 aa3.68□□□□□ -1.82
USA1YML029W GPP1P41277 250 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W FMP32P43557 207 aa3.68□□□□□ -1.82
USA1YML029W ROG1P53118 685 aa3.68□□□□□ -1.82
USA1YML029W GET1P53192 235 aa3.68□□□□□ -1.82
USA1YML029W COS6P53344 381 aa3.68□□□□□ -1.82
USA1YML029W DSL1P53847 754 aa3.68□□□□□ -1.82
USA1YML029W HMO1Q03973 246 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W SWF1Q04629 336 aa3.68□□□□□ -1.82
USA1YML029W SPC2Q04969 178 aa3.68□□□□□ -1.82
USA1YML029W RSF1Q05043 376 aa3.68□□□□□ -1.82
USA1YML029W RRT8Q08219 342 aa3.68□□□□□ -1.82
USA1YML029W RRP40Q08285 240 aaKnown RBP3.68□□□□□ -1.82
USA1YML029W GYP1Q08484 637 aa3.68□□□□□ -1.82
USA1YML029W YTM1Q12024 460 aaPredicted RBP3.68□□□□□ -1.82
USA1YML029W SFM1Q12314 213 aa3.68□□□□□ -1.82
USA1YML029W HSP42Q12329 375 aa3.68□□□□□ -1.82
USA1YML029W ARG81P05085 880 aa3.67□□□□□ -1.82
USA1YML029W ARG3P05150 338 aa3.67□□□□□ -1.82
USA1YML029W KIN2P13186 1147 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W UGA1P17649 471 aa3.67□□□□□ -1.82
USA1YML029W POL4P25615 582 aa3.67□□□□□ -1.82
USA1YML029W PMT2P31382 759 aa3.67□□□□□ -1.82
USA1YML029W ORC2P32833 620 aa3.67□□□□□ -1.82
USA1YML029W RPT5P33297 434 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W SWH1P35845 1188 aa3.67□□□□□ -1.82
USA1YML029W CBP4P37267 147 aa3.67□□□□□ -1.82
USA1YML029W COS111P38308 924 aa3.67□□□□□ -1.82
USA1YML029W FAD1P38913 306 aa3.67□□□□□ -1.82
USA1YML029W HOS2P53096 452 aaPredicted RBP3.67□□□□□ -1.82
USA1YML029W ERG26P53199 349 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W YNL033WP53964 284 aa3.67□□□□□ -1.82
USA1YML029W YNL019CP53975 284 aa3.67□□□□□ -1.82
USA1YML029W OAZ1Q02803 292 aa3.67□□□□□ -1.82
USA1YML029W RAD33Q04231 177 aa3.67□□□□□ -1.82
USA1YML029W BOP2Q06150 570 aa3.67□□□□□ -1.82
USA1YML029W GMC2Q06201 188 aa3.67□□□□□ -1.82
USA1YML029W GUP2Q08929 609 aa3.67□□□□□ -1.82
USA1YML029W PAR32Q12515 295 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W ATP4P05626 244 aa3.67□□□□□ -1.82
USA1YML029W PUT2P07275 575 aa3.67□□□□□ -1.82
USA1YML029W MSS18P08593 268 aa3.67□□□□□ -1.82
USA1YML029W DPH5P32469 300 aaPredicted RBP3.67□□□□□ -1.82
USA1YML029W SUI1P32911 108 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W MRP8P35719 219 aa3.67□□□□□ -1.82
USA1YML029W YOR062CP36025 268 aa3.67□□□□□ -1.82
USA1YML029W PDX3P38075 228 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W ATG14P38270 344 aa3.67□□□□□ -1.82
USA1YML029W RGI1P40043 161 aaPredicted RBP3.67□□□□□ -1.82
USA1YML029W FAU1P40099 211 aa3.67□□□□□ -1.82
USA1YML029W AZF1P41696 914 aa3.67□□□□□ -1.82
USA1YML029W DUG1P43616 481 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W NOP9P47077 666 aaKnown RBP3.67□□□□□ -1.82
USA1YML029W GPI1P53306 609 aa3.67□□□□□ -1.82
USA1YML029W YMR210WQ03649 449 aa3.67□□□□□ -1.82
USA1YML029W YMR010WQ03687 405 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms