RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W ADH1P00330 348 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W COX4P04037 155 aa1.74□□□□□ -2.13
HIT1YJR055W CBP6P07253 162 aaPredicted RBP1.74□□□□□ -2.13
HIT1YJR055W NAM2P11325 894 aa1.74□□□□□ -2.13
HIT1YJR055W RPI1P23250 407 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W AAT2P23542 418 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W SPB1P25582 841 aaPredicted RBP1.74□□□□□ -2.13
HIT1YJR055W IES6P32617 166 aa1.74□□□□□ -2.13
HIT1YJR055W NIP100P33420 868 aa1.74□□□□□ -2.13
HIT1YJR055W NOP16P40007 231 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W JLP2P40206 208 aa1.74□□□□□ -2.13
HIT1YJR055W ARF3P40994 183 aaRIP-Chip data1.74□□□□□ -2.13not detected
HIT1YJR055W YGR149WP48236 432 aa1.74□□□□□ -2.13
HIT1YJR055W CRH1P53301 507 aa1.74□□□□□ -2.13
HIT1YJR055W YIF1P53845 314 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W RHO5P53879 331 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W MTQ1P53944 314 aa1.74□□□□□ -2.13
HIT1YJR055W SGT1Q08446 395 aa1.74□□□□□ -2.13
HIT1YJR055W USO1P25386 1790 aa1.74□□□□□ -2.13
HIT1YJR055W TY1B-JR2P47100 1755 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W TY1B-ER2Q03619 1755 aa1.74□□□□□ -2.13
HIT1YJR055W TY1B-MR1Q04214 1755 aa1.74□□□□□ -2.13
HIT1YJR055W TY1B-MR2Q04670 1755 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W TY1B-LR1Q12088 1755 aaKnown RBP1.74□□□□□ -2.13
HIT1YJR055W TY1B-NL1Q12112 1755 aa1.74□□□□□ -2.13
HIT1YJR055W TY1B-GR1Q12141 1755 aa1.74□□□□□ -2.13
HIT1YJR055W TY1B-BLQ12490 1755 aa1.74□□□□□ -2.13
HIT1YJR055W TRM732Q03496 1420 aa1.74□□□□□ -2.13
HIT1YJR055W GCN4P03069 281 aa1.73□□□□□ -2.13
HIT1YJR055W IDH2P28241 369 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W RAD14P28519 371 aa1.73□□□□□ -2.13
HIT1YJR055W CYS4P32582 507 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W BAT1P38891 393 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W VMA13P41807 478 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W PFS2P42841 465 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W PGU1P47180 361 aa1.73□□□□□ -2.13
HIT1YJR055W AZR1P50080 613 aa1.73□□□□□ -2.13
HIT1YJR055W SYF1Q04048 859 aaPredicted RBP1.73□□□□□ -2.13
HIT1YJR055W TSR2Q06672 205 aaKnown RBP1.73□□□□□ -2.13
HIT1YJR055W RMD5Q12508 421 aa1.73□□□□□ -2.13
HIT1YJR055W ULS1Q08562 1619 aa1.73□□□□□ -2.13
HIT1YJR055W MMS22Q06164 1454 aa1.72□□□□□ -2.13
HIT1YJR055W SEM1O94742 89 aa1.72□□□□□ -2.13
HIT1YJR055W RAD57P25301 460 aa1.72□□□□□ -2.13
HIT1YJR055W RPN12P32496 274 aa1.72□□□□□ -2.13
HIT1YJR055W FMT1P32785 401 aa1.72□□□□□ -2.13
HIT1YJR055W CST26P38226 397 aa1.72□□□□□ -2.13
HIT1YJR055W OXA1P39952 402 aa1.72□□□□□ -2.13
HIT1YJR055W MET28P40573 187 aa1.72□□□□□ -2.13
HIT1YJR055W NUP116Q02630 1113 aa1.72□□□□□ -2.13
HIT1YJR055W YML133CQ03099 1374 aa1.72□□□□□ -2.13
HIT1YJR055W YLL067CQ07888 1374 aa1.72□□□□□ -2.13
HIT1YJR055W YLL066CQ99208 1374 aa1.72□□□□□ -2.13
HIT1YJR055W MRP7P12687 371 aa1.71□□□□□ -2.14
HIT1YJR055W OCA4P25366 362 aa1.71□□□□□ -2.14
HIT1YJR055W JNM1P36224 373 aa1.71□□□□□ -2.14
HIT1YJR055W DTR1P38125 572 aa1.71□□□□□ -2.14
HIT1YJR055W SAS2P40963 338 aa1.71□□□□□ -2.14
HIT1YJR055W BIR1P47134 954 aa1.71□□□□□ -2.14
HIT1YJR055W ATP22P50273 684 aaPredicted RBP1.71□□□□□ -2.14
HIT1YJR055W TWF1P53250 332 aa1.71□□□□□ -2.14
HIT1YJR055W HST1P53685 503 aa1.71□□□□□ -2.14
HIT1YJR055W BET5Q03630 159 aa1.71□□□□□ -2.14
HIT1YJR055W RIM20Q12033 661 aa1.71□□□□□ -2.14
HIT1YJR055W SMF3Q12078 473 aaPredicted RBP1.71□□□□□ -2.14
HIT1YJR055W CHC1P22137 1653 aaKnown RBP1.71□□□□□ -2.14
HIT1YJR055W ILV5P06168 395 aaKnown RBP1.7□□□□□ -2.14
HIT1YJR055W MSI1P13712 422 aa1.7□□□□□ -2.14
HIT1YJR055W SRV2P17555 526 aaKnown RBP1.7□□□□□ -2.14
HIT1YJR055W PRR1P28708 518 aa1.7□□□□□ -2.14
HIT1YJR055W OM14P38325 134 aa1.7□□□□□ -2.14
HIT1YJR055W ALD5P40047 520 aaKnown RBP1.7□□□□□ -2.14
HIT1YJR055W NDE1P40215 560 aa1.7□□□□□ -2.14
HIT1YJR055W YFR057WP43625 151 aa1.7□□□□□ -2.14
HIT1YJR055W HMS2P47175 358 aa1.7□□□□□ -2.14
HIT1YJR055W UPF3P48412 387 aaKnown RBP1.7□□□□□ -2.14
HIT1YJR055W YPS5P53057 165 aa1.7□□□□□ -2.14
HIT1YJR055W BCH1Q05029 724 aa1.7□□□□□ -2.14
HIT1YJR055W COG4Q06096 861 aa1.7□□□□□ -2.14
HIT1YJR055W RIF2Q06208 395 aa1.7□□□□□ -2.14
HIT1YJR055W TRM3Q07527 1436 aa1.7□□□□□ -2.14
HIT1YJR055W NUM1Q00402 2748 aa1.7□□□□□ -2.14
HIT1YJR055W GDB1Q06625 1536 aa1.7□□□□□ -2.14
HIT1YJR055W SPP41P38904 1435 aa1.69□□□□□ -2.14
HIT1YJR055W SEC63P14906 663 aa1.69□□□□□ -2.14
HIT1YJR055W RPB5P20434 215 aa1.69□□□□□ -2.14
HIT1YJR055W OLE1P21147 510 aaKnown RBP1.69□□□□□ -2.14
HIT1YJR055W DPH2P32461 534 aa1.69□□□□□ -2.14
HIT1YJR055W SEC66P33754 206 aa1.69□□□□□ -2.14
HIT1YJR055W YHR054CP38780 354 aa1.69□□□□□ -2.14
HIT1YJR055W SBE22P38814 852 aa1.69□□□□□ -2.14
HIT1YJR055W YEL057CP39983 233 aa1.69□□□□□ -2.14
HIT1YJR055W DLD2P46681 530 aaKnown RBP1.69□□□□□ -2.14
HIT1YJR055W VPS75P53853 264 aa1.69□□□□□ -2.14
HIT1YJR055W MRPL19P53875 158 aa1.69□□□□□ -2.14
HIT1YJR055W YET2Q04210 160 aa1.69□□□□□ -2.14
HIT1YJR055W SKI7Q08491 747 aaPredicted RBP1.69□□□□□ -2.14
HIT1YJR055W MED1Q12321 566 aa1.69□□□□□ -2.14
HIT1YJR055W RAX2Q12465 1220 aa1.69□□□□□ -2.14
HIT1YJR055W ARG3P05150 338 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms