RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W DCI1Q08558 271 aa2.25□□□□□ -2.05
PEP8YJL053W YOR387CQ08910 206 aa2.25□□□□□ -2.05
PEP8YJL053W ATG34Q12292 412 aa2.25□□□□□ -2.05
PEP8YJL053W ERP4Q12450 207 aa2.25□□□□□ -2.05
PEP8YJL053W CEX1Q12453 761 aa2.25□□□□□ -2.05
PEP8YJL053W ADE4P04046 510 aaKnown RBP2.24□□□□□ -2.05
PEP8YJL053W PDE2P06776 526 aa2.24□□□□□ -2.05
PEP8YJL053W DAL2P25335 343 aa2.24□□□□□ -2.05
PEP8YJL053W GEX1P25596 615 aa2.24□□□□□ -2.05
PEP8YJL053W ATP3P38077 311 aaKnown RBP2.24□□□□□ -2.05
PEP8YJL053W RRP4P38792 359 aaKnown RBP2.24□□□□□ -2.05
PEP8YJL053W SIM1P40472 476 aa2.24□□□□□ -2.05
PEP8YJL053W YJL055WP47044 245 aa2.24□□□□□ -2.05
PEP8YJL053W BRO1P48582 844 aa2.24□□□□□ -2.05
PEP8YJL053W AZR1P50080 613 aa2.24□□□□□ -2.05
PEP8YJL053W PHB2P50085 310 aa2.24□□□□□ -2.05
PEP8YJL053W ALF1P53904 254 aa2.24□□□□□ -2.05
PEP8YJL053W OAZ1Q02803 292 aa2.24□□□□□ -2.05
PEP8YJL053W ELP3Q02908 557 aaKnown RBP2.24□□□□□ -2.05
PEP8YJL053W SRL2Q12020 392 aa2.24□□□□□ -2.05
PEP8YJL053W ERV2Q12284 196 aa2.24□□□□□ -2.05
PEP8YJL053W RMD5Q12508 421 aa2.24□□□□□ -2.05
PEP8YJL053W ILV5P06168 395 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W SPO12P17123 173 aa2.23□□□□□ -2.05
PEP8YJL053W PET123P17558 318 aa2.23□□□□□ -2.05
PEP8YJL053W HSP104P31539 908 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W ZTA1P38230 334 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W GAT2P40209 560 aa2.23□□□□□ -2.05
PEP8YJL053W SFH5P47008 294 aa2.23□□□□□ -2.05
PEP8YJL053W RHO5P53879 331 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W MMT1Q03218 510 aa2.23□□□□□ -2.05
PEP8YJL053W RPN9Q04062 393 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W URH1Q04179 340 aa2.23□□□□□ -2.05
PEP8YJL053W GYL1Q04322 720 aa2.23□□□□□ -2.05
PEP8YJL053W TPT1Q12272 230 aaKnown RBP2.23□□□□□ -2.05
PEP8YJL053W SNU66Q12420 587 aaPredicted RBP2.23□□□□□ -2.05
PEP8YJL053W TRP1P00912 224 aa2.22□□□□□ -2.05
PEP8YJL053W DST1P07273 309 aa2.22□□□□□ -2.05
PEP8YJL053W CDC60P26637 1090 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W NAM9P27929 486 aa2.22□□□□□ -2.05
PEP8YJL053W ITR1P30605 584 aa2.22□□□□□ -2.05
PEP8YJL053W NIP1P32497 812 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W CYS4P32582 507 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W MNS1P32906 549 aa2.22□□□□□ -2.05
PEP8YJL053W RRP1P35178 278 aaPredicted RBP2.22□□□□□ -2.05
PEP8YJL053W ASC1P38011 319 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W REE1P40893 198 aa2.22□□□□□ -2.05
PEP8YJL053W PIB2P53191 635 aa2.22□□□□□ -2.05
PEP8YJL053W RSC1P53236 928 aa2.22□□□□□ -2.05
PEP8YJL053W CWC25P53854 179 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W HXT11P54862 567 aa2.22□□□□□ -2.05
PEP8YJL053W PEX25Q02969 394 aa2.22□□□□□ -2.05
PEP8YJL053W PRP42Q03776 544 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W BCH1Q05029 724 aa2.22□□□□□ -2.05
PEP8YJL053W PAL1Q05518 499 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W HRI1Q05905 244 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W RRP9Q06506 573 aaKnown RBP2.22□□□□□ -2.05
PEP8YJL053W GPM3Q12326 303 aa2.22□□□□□ -2.05
PEP8YJL053W CDC21P06785 304 aa2.21□□□□□ -2.06
PEP8YJL053W IMA3P0CW40 589 aa2.21□□□□□ -2.06
PEP8YJL053W IMA4P0CW41 589 aa2.21□□□□□ -2.06
PEP8YJL053W NAM2P11325 894 aa2.21□□□□□ -2.06
PEP8YJL053W POP5P28005 173 aa2.21□□□□□ -2.06
PEP8YJL053W RIM1P32445 135 aaKnown RBP2.21□□□□□ -2.06
PEP8YJL053W HXT1P32465 570 aa2.21□□□□□ -2.06
PEP8YJL053W HEL1P36113 551 aa2.21□□□□□ -2.06
PEP8YJL053W RFS1P38234 210 aaKnown RBP2.21□□□□□ -2.06
PEP8YJL053W FAD1P38913 306 aa2.21□□□□□ -2.06
PEP8YJL053W COX14P39103 70 aa2.21□□□□□ -2.06
PEP8YJL053W YER079WP40052 210 aaKnown RBP2.21□□□□□ -2.06
PEP8YJL053W SER3P40054 469 aa2.21□□□□□ -2.06
PEP8YJL053W MMF1P40185 145 aaKnown RBP2.21□□□□□ -2.06
PEP8YJL053W YIL029CP40538 142 aa2.21□□□□□ -2.06
PEP8YJL053W STD1Q02794 444 aa2.21□□□□□ -2.06
PEP8YJL053W YLR456WQ06199 204 aa2.21□□□□□ -2.06
PEP8YJL053W IMA2Q08295 589 aa2.21□□□□□ -2.06
PEP8YJL053W SPE3Q12074 293 aaKnown RBP2.21□□□□□ -2.06
PEP8YJL053W YCL068CP25593 260 aa2.2□□□□□ -2.06
PEP8YJL053W COX13P32799 129 aa2.2□□□□□ -2.06
PEP8YJL053W CHK1P38147 527 aa2.2□□□□□ -2.06
PEP8YJL053W YBR137WP38276 179 aa2.2□□□□□ -2.06
PEP8YJL053W INM1P38710 295 aa2.2□□□□□ -2.06
PEP8YJL053W STN1P38960 494 aa2.2□□□□□ -2.06
PEP8YJL053W GDI1P39958 451 aaKnown RBP2.2□□□□□ -2.06
PEP8YJL053W JLP2P40206 208 aa2.2□□□□□ -2.06
PEP8YJL053W PAN6P40459 309 aa2.2□□□□□ -2.06
PEP8YJL053W YPS6P40583 537 aa2.2□□□□□ -2.06
PEP8YJL053W LCB2P40970 561 aa2.2□□□□□ -2.06
PEP8YJL053W SDT1P53078 280 aa2.2□□□□□ -2.06
PEP8YJL053W MTQ1P53944 314 aa2.2□□□□□ -2.06
PEP8YJL053W IRC25Q07951 179 aa2.2□□□□□ -2.06
PEP8YJL053W RAX1Q08760 435 aa2.2□□□□□ -2.06
PEP8YJL053W COX3P00420 269 aa2.19□□□□□ -2.06
PEP8YJL053W ARO3P14843 370 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W RVS161P25343 265 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W SLM5P25345 492 aaKnown RBP2.19□□□□□ -2.06
PEP8YJL053W PHO91P27514 894 aa2.19□□□□□ -2.06
PEP8YJL053W YEL045CP32616 141 aa2.19□□□□□ -2.06
PEP8YJL053W MDL1P33310 695 aa2.19□□□□□ -2.06
PEP8YJL053W MSG5P38590 489 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 107.6 ms