RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W YUH1P35127 236 aa3.21□□□□□ -1.9
SIZ1YDR409W YHL012WP38709 493 aa3.21□□□□□ -1.9
SIZ1YDR409W FHL1P39521 936 aa3.21□□□□□ -1.9
SIZ1YDR409W JHD1P40034 492 aa3.21□□□□□ -1.9
SIZ1YDR409W THO1P40040 218 aaKnown RBP3.21□□□□□ -1.9
SIZ1YDR409W FAR7P43592 221 aa3.21□□□□□ -1.9
SIZ1YDR409W YJL132WP47014 750 aa3.21□□□□□ -1.9
SIZ1YDR409W SPR6Q01684 191 aa3.21□□□□□ -1.9
SIZ1YDR409W CRF1Q04930 467 aa3.21□□□□□ -1.9
SIZ1YDR409W CDC123Q05791 360 aa3.21□□□□□ -1.9
SIZ1YDR409W CRD1Q07560 283 aa3.21□□□□□ -1.9
SIZ1YDR409W AIM39Q08223 395 aa3.21□□□□□ -1.9
SIZ1YDR409W YOL159CQ08300 171 aa3.21□□□□□ -1.9
SIZ1YDR409W IES4Q08561 116 aa3.21□□□□□ -1.9
SIZ1YDR409W YPL119C-AQ3E751 87 aa3.21□□□□□ -1.9
SIZ1YDR409W ERS1P17261 260 aa3.2□□□□□ -1.9
SIZ1YDR409W DAL81P21657 970 aa3.2□□□□□ -1.9
SIZ1YDR409W SEC62P21825 274 aa3.2□□□□□ -1.9
SIZ1YDR409W CLB3P24870 427 aa3.2□□□□□ -1.9
SIZ1YDR409W KIN82P25341 720 aa3.2□□□□□ -1.9
SIZ1YDR409W HIR2P32480 875 aa3.2□□□□□ -1.9
SIZ1YDR409W YMC2P38087 329 aa3.2□□□□□ -1.9
SIZ1YDR409W ROT2P38138 954 aa3.2□□□□□ -1.9
SIZ1YDR409W SLX1P38324 304 aa3.2□□□□□ -1.9
SIZ1YDR409W KEL1P38853 1164 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W ALD5P40047 520 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W UTP18P40362 594 aaPredicted RBP3.2□□□□□ -1.9
SIZ1YDR409W YGR210CP42942 411 aa3.2□□□□□ -1.9
SIZ1YDR409W RPN11P43588 306 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W RTT101P47050 842 aa3.2□□□□□ -1.9
SIZ1YDR409W HOC1P47124 396 aa3.2□□□□□ -1.9
SIZ1YDR409W KEL2P50090 882 aa3.2□□□□□ -1.9
SIZ1YDR409W GLO1P50107 326 aa3.2□□□□□ -1.9
SIZ1YDR409W YGR045CP53229 120 aa3.2□□□□□ -1.9
SIZ1YDR409W RTT102P53330 157 aa3.2□□□□□ -1.9
SIZ1YDR409W COG5P53951 403 aa3.2□□□□□ -1.9
SIZ1YDR409W SLM2P53955 656 aa3.2□□□□□ -1.9
SIZ1YDR409W NAM8Q00539 523 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W MUK1Q02866 612 aa3.2□□□□□ -1.9
SIZ1YDR409W VPS36Q06696 566 aa3.2□□□□□ -1.9
SIZ1YDR409W DTD1Q07648 150 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W YEH1Q07804 573 aa3.2□□□□□ -1.9
SIZ1YDR409W SLD7Q08457 257 aa3.2□□□□□ -1.9
SIZ1YDR409W THP3Q12049 470 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W PKH2Q12236 1081 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W ATG34Q12292 412 aa3.2□□□□□ -1.9
SIZ1YDR409W TRM10Q12400 293 aa3.2□□□□□ -1.9
SIZ1YDR409W IZH4Q99393 312 aa3.2□□□□□ -1.9
SIZ1YDR409W TDH1P00360 332 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W COX4P04037 155 aa3.2□□□□□ -1.9
SIZ1YDR409W YPK1P12688 680 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W CCA1P21269 546 aa3.2□□□□□ -1.9
SIZ1YDR409W CHL1P22516 861 aaPredicted RBP3.2□□□□□ -1.9
SIZ1YDR409W OCA4P25366 362 aa3.2□□□□□ -1.9
SIZ1YDR409W CHA1P25379 360 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W PRP21P32524 280 aaPredicted RBP3.2□□□□□ -1.9
SIZ1YDR409W SEC61P32915 480 aa3.2□□□□□ -1.9
SIZ1YDR409W FRE2P36033 711 aa3.2□□□□□ -1.9
SIZ1YDR409W FMP23P38231 175 aa3.2□□□□□ -1.9
SIZ1YDR409W PHO88P38264 188 aaPredicted RBP3.2□□□□□ -1.9
SIZ1YDR409W FAD1P38913 306 aa3.2□□□□□ -1.9
SIZ1YDR409W YEL020CP39994 560 aa3.2□□□□□ -1.9
SIZ1YDR409W HAM1P47119 197 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W AIF1P52923 378 aa3.2□□□□□ -1.9
SIZ1YDR409W ART5P53244 586 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W YMR111CQ04461 462 aaPredicted RBP3.2□□□□□ -1.9
SIZ1YDR409W ARP10Q04549 284 aa3.2□□□□□ -1.9
SIZ1YDR409W SAM4Q08985 325 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W ALG6Q12001 544 aaKnown RBP3.2□□□□□ -1.9
SIZ1YDR409W YBR126W-AQ8TGU7 68 aa3.2□□□□□ -1.9
SIZ1YDR409W SEC15P22224 910 aa3.19□□□□□ -1.9
SIZ1YDR409W DBR1P24309 405 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W GIT1P25346 518 aa3.19□□□□□ -1.9
SIZ1YDR409W UBC8P28263 218 aa3.19□□□□□ -1.9
SIZ1YDR409W SPT14P32363 452 aa3.19□□□□□ -1.9
SIZ1YDR409W MSS1P32559 526 aaPredicted RBP3.19□□□□□ -1.9
SIZ1YDR409W RML2P32611 393 aa3.19□□□□□ -1.9
SIZ1YDR409W IMP3P32899 183 aaPredicted RBP3.19□□□□□ -1.9
SIZ1YDR409W LOT5P34234 306 aa3.19□□□□□ -1.9
SIZ1YDR409W ALY1P36117 915 aa3.19□□□□□ -1.9
SIZ1YDR409W YHI9P38765 294 aa3.19□□□□□ -1.9
SIZ1YDR409W MTG2P38860 518 aa3.19□□□□□ -1.9
SIZ1YDR409W IPT1P38954 527 aa3.19□□□□□ -1.9
SIZ1YDR409W YER137CP40083 148 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W ARF3P40994 183 aaRIP-Chip data3.19□□□□□ -1.9 RIP-Chip
SIZ1YDR409W ALB1P47019 175 aaPredicted RBP3.19□□□□□ -1.9
SIZ1YDR409W DIE2P50076 525 aa3.19□□□□□ -1.9
SIZ1YDR409W GIM3P53900 129 aa3.19□□□□□ -1.9
SIZ1YDR409W ELP3Q02908 557 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W CWC21Q03375 135 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W SEG1Q04279 960 aa3.19□□□□□ -1.9
SIZ1YDR409W RQC1Q05468 723 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W ARR3Q06598 404 aa3.19□□□□□ -1.9
SIZ1YDR409W MDM36Q06820 579 aa3.19□□□□□ -1.9
SIZ1YDR409W RAX1Q08760 435 aa3.19□□□□□ -1.9
SIZ1YDR409W WSC3Q12215 556 aa3.19□□□□□ -1.9
SIZ1YDR409W GTT2Q12390 233 aa3.19□□□□□ -1.9
SIZ1YDR409W PRE2P30656 287 aaKnown RBP3.19□□□□□ -1.9
SIZ1YDR409W YKL063CP35725 167 aa3.19□□□□□ -1.9
SIZ1YDR409W PHO11P35842 467 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms