RNA–Protein interactions for RNA: YDR355C

YDR355C, Transcript of Dubious open reading frame, yeast

Gene YDR355C, Length 303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR355C	YDR355C	YFR018C	P43599	363 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	YHC3	P47040	408 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	EFM3	P47163	339 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	MMT1	Q03218	510 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	YMR310C	Q04867	317 aa	Predicted RBP	3.45	□□□□□ -1.86
YDR355C	YDR355C	BNA5	Q05979	453 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	ARR1	Q06596	294 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	DSE3	Q08729	430 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	RUP1	Q12242	671 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	RNH203	Q12338	110 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	SFG1	Q12507	346 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	RAD61	Q99359	647 aa		3.45	□□□□□ -1.86
YDR355C	YDR355C	GAL7	P08431	366 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	COX13	P32799	129 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	PPQ1	P32945	549 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	RIB7	P33312	244 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	SIP2	P34164	415 aa	Known RBP	3.44	□□□□□ -1.86
YDR355C	YDR355C	TIF5	P38431	405 aa	Known RBP	3.44	□□□□□ -1.86
YDR355C	YDR355C	YAL037W	P39728	267 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	GUF1	P46943	645 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	BNA3	P47039	444 aa	Known RBP	3.44	□□□□□ -1.86
YDR355C	YDR355C	IKS1	P47042	667 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	AVT4	P50944	713 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	PMT5	P52867	743 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	POP6	P53218	158 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	RTT102	P53330	157 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	MGR3	Q04472	501 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	ASA1	Q06822	443 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	MUM3	Q08750	479 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	ATG34	Q12292	412 aa		3.44	□□□□□ -1.86
YDR355C	YDR355C	INO80	P53115	1489 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	VPS63	O13549	108 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	YPT1	P01123	206 aa	Known RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	TEF1	P02994	458 aa	Known RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	ARG4	P04076	463 aa	Predicted RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	MAS1	P10507	462 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	SPO12	P17123	173 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	YCP4	P25349	247 aa	Known RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	LSB5	P25369	354 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	YCR022C	P25620	114 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	DAL80	P26343	269 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	ALP1	P38971	573 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	END3	P39013	349 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	SHO1	P40073	367 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	ATM1	P40416	690 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	YIR014W	P40570	242 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	MKT1	P40850	830 aa	Known RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	YNL146W	P53906	100 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	PIR3	Q03180	325 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	RSN1	Q03516	953 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	RRB1	Q04225	511 aa	Known RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	YMR111C	Q04461	462 aa	Predicted RBP	3.43	□□□□□ -1.86
YDR355C	YDR355C	SNA4	Q07549	140 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	AAD15	Q08361	143 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	YPL199C	Q08954	240 aa		3.43	□□□□□ -1.86
YDR355C	YDR355C	TPK3	P05986	398 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	PUT4	P15380	627 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	HXT2	P23585	541 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	GLC7	P32598	312 aa	Known RBP	3.42	□□□□□ -1.86
YDR355C	YDR355C	DOA1	P36037	715 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	MRPL40	P36534	297 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	ATP3	P38077	311 aa	Known RBP	3.42	□□□□□ -1.86
YDR355C	YDR355C	LAM5	P43560	674 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	ARP5	P53946	755 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	URH1	Q04179	340 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	URC2	Q04411	772 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	COQ11	Q05892	277 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	YLR297W	Q05899	129 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	RRP9	Q06506	573 aa	Known RBP	3.42	□□□□□ -1.86
YDR355C	YDR355C	SKI7	Q08491	747 aa	Predicted RBP	3.42	□□□□□ -1.86
YDR355C	YDR355C	TIM18	Q08749	192 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	PKH2	Q12236	1081 aa	Known RBP	3.42	□□□□□ -1.86
YDR355C	YDR355C	SPO24	Q3E752	67 aa		3.42	□□□□□ -1.86
YDR355C	YDR355C	RPL12A	P0CX53	165 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	RPL12B	P0CX54	165 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	PRP16	P15938	1071 aa	Predicted RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	THR4	P16120	514 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	SLY1	P22213	666 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	DBR1	P24309	405 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	NIP1	P32497	812 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	DHH1	P39517	506 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	SSO2	P39926	295 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	YIL169C	P40442	995 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	YGL114W	P53134	725 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	SCW4	P53334	386 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	ERV25	P54837	211 aa	Known RBP	3.41	□□□□□ -1.86
YDR355C	YDR355C	ODC1	Q03028	310 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	NUP53	Q03790	475 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	FMP42	Q04991	504 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	LDS2	Q08218	356 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	SGT1	Q08446	395 aa		3.41	□□□□□ -1.86
YDR355C	YDR355C	CDC37	P06101	506 aa	Known RBP	3.4	□□□□□ -1.87
YDR355C	YDR355C	ATP1	P07251	545 aa	Known RBP	3.4	□□□□□ -1.87
YDR355C	YDR355C	YLL053C	P0CD98	152 aa		3.4	□□□□□ -1.87
YDR355C	YDR355C	ARF1	P11076	181 aa	Known RBP	3.4	□□□□□ -1.87
YDR355C	YDR355C	GAL3	P13045	520 aa		3.4	□□□□□ -1.87
YDR355C	YDR355C	TIP1	P27654	210 aa	Predicted RBP	3.4	□□□□□ -1.87
YDR355C	YDR355C	ITR1	P30605	584 aa		3.4	□□□□□ -1.87
YDR355C	YDR355C	MSK1	P32048	576 aa		3.4	□□□□□ -1.87
YDR355C	YDR355C	HMX1	P32339	317 aa		3.4	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms