RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	YEL045C	P32616	141 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
TRP4	YDR354W	CMC1	P36064	111 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	VID24	P38263	362 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	ODC1	Q03028	310 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	YMR111C	Q04461	462 aa	Predicted RBP	4.01	□□□□□ -1.77
TRP4	YDR354W	RRN11	Q04712	507 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	SOV1	Q04748	898 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	YLR287C	Q05881	355 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	NKP2	Q06162	153 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	YPL199C	Q08954	240 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	SMC6	Q12749	1114 aa		4.01	□□□□□ -1.77
TRP4	YDR354W	SAC3	P46674	1301 aa		4	□□□□□ -1.77
TRP4	YDR354W	HHF1	P02309	103 aa	Known RBP	4	□□□□□ -1.77
TRP4	YDR354W	TPM1	P17536	199 aa	Known RBP	4	□□□□□ -1.77
TRP4	YDR354W	SPB1	P25582	841 aa	Predicted RBP	4	□□□□□ -1.77
TRP4	YDR354W	GPI10	P30777	616 aa		4	□□□□□ -1.77
TRP4	YDR354W	SRP72	P38688	640 aa	Known RBP	4	□□□□□ -1.77
TRP4	YDR354W	PRE5	P40302	234 aa	Known RBP	4	□□□□□ -1.77
TRP4	YDR354W	JEM1	P40358	645 aa		4	□□□□□ -1.77
TRP4	YDR354W	MET18	P40469	1032 aa		4	□□□□□ -1.77
TRP4	YDR354W	HXT14	P42833	540 aa		4	□□□□□ -1.77
TRP4	YDR354W	YGR149W	P48236	432 aa		4	□□□□□ -1.77
TRP4	YDR354W	YML6	P51998	286 aa		4	□□□□□ -1.77
TRP4	YDR354W	PNG1	Q02890	363 aa		4	□□□□□ -1.77
TRP4	YDR354W	YDR286C	Q05530	114 aa		4	□□□□□ -1.77
TRP4	YDR354W	RRG1	Q12167	365 aa	Predicted RBP	4	□□□□□ -1.77
TRP4	YDR354W	SCM3	Q12334	223 aa		4	□□□□□ -1.77
TRP4	YDR354W	IDH2	P28241	369 aa	Known RBP	3.99	□□□□□ -1.77
TRP4	YDR354W	SEC66	P33754	206 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	YCR041W	P37265	110 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	OST1	P41543	476 aa	Known RBP	3.99	□□□□□ -1.77
TRP4	YDR354W	YGR210C	P42942	411 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	PCP1	P53259	346 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	BNI5	P53890	448 aa	Known RBP	3.99	□□□□□ -1.77
TRP4	YDR354W	CSI1	Q04368	295 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	MRPL35	Q06678	367 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	TSR1	Q07381	788 aa	Known RBP	3.99	□□□□□ -1.77
TRP4	YDR354W	APC5	Q08683	685 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	PGC1	Q08959	321 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	RIM20	Q12033	661 aa		3.99	□□□□□ -1.77
TRP4	YDR354W	RHO2	P06781	192 aa		3.98	□□□□□ -1.77
TRP4	YDR354W	RPS24A	P0CX31	135 aa	Known RBP	3.98	□□□□□ -1.77
TRP4	YDR354W	RPS24B	P0CX32	135 aa	Known RBP	3.98	□□□□□ -1.77
TRP4	YDR354W	RNA1	P11745	407 aa	Known RBP	3.98	□□□□□ -1.77
TRP4	YDR354W	RED1	P14291	827 aa		3.98	□□□□□ -1.77
TRP4	YDR354W	RAD14	P28519	371 aa		3.98	□□□□□ -1.77
TRP4	YDR354W	SWD3	P38123	315 aa		3.98	□□□□□ -1.77
TRP4	YDR354W	TOF1	P53840	1238 aa		3.98	□□□□□ -1.77
TRP4	YDR354W	RPS19A	P07280	144 aa	Known RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	RPS19B	P07281	144 aa	Predicted RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	CLN3	P13365	580 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	RAD51	P25454	400 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	DBF4	P32325	704 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	RRF1	P38771	230 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	LRP1	P38801	184 aa	Known RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	VMA13	P41807	478 aa	Known RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	WWM1	P43582	211 aa	Known RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	JJJ1	P53863	590 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	MRPL19	P53875	158 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	IBD2	P53892	351 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	NCS2	P53923	493 aa	Predicted RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	YNL050C	P53952	270 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	SYF1	Q04048	859 aa	Predicted RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	VPS20	Q04272	221 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	PAL1	Q05518	499 aa	Known RBP	3.97	□□□□□ -1.77
TRP4	YDR354W	YPR172W	Q06608	200 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	YLR108C	Q12259	485 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	HKR1	P41809	1802 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	MYO1	P08964	1928 aa		3.97	□□□□□ -1.77
TRP4	YDR354W	TRX1	P22217	103 aa	Known RBP	3.96	□□□□□ -1.78
TRP4	YDR354W	MIX23	P38162	196 aa		3.96	□□□□□ -1.78
TRP4	YDR354W	DED81	P38707	554 aa	Known RBP	3.96	□□□□□ -1.78
TRP4	YDR354W	ARF3	P40994	183 aa	RIP-Chip data	3.96	□□□□□ -1.78	not detected
TRP4	YDR354W	KEL2	P50090	882 aa		3.96	□□□□□ -1.78
TRP4	YDR354W	YIP1	P53039	248 aa		3.96	□□□□□ -1.78
TRP4	YDR354W	RMD9	P53140	646 aa	Known RBP	3.96	□□□□□ -1.78
TRP4	YDR354W	TMC1	Q08422	150 aa	Predicted RBP	3.96	□□□□□ -1.78
TRP4	YDR354W	GSC2	P40989	1895 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	MET17	P06106	444 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	RPC40	P07703	335 aa	Known RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	VMA2	P16140	517 aa	Known RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	PPH22	P23595	377 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	DPH2	P32461	534 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	PTH1	P38876	190 aa	Known RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	TFG2	P41896	400 aa	Predicted RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	FYV8	P46949	817 aa	Known RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	TIM11	P81449	96 aa	Predicted RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
TRP4	YDR354W	MRP51	Q02950	344 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	CWC21	Q03375	135 aa	Known RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	MUM3	Q08750	479 aa		3.95	□□□□□ -1.78
TRP4	YDR354W	RRG7	Q08774	242 aa	Predicted RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	SMF3	Q12078	473 aa	Predicted RBP	3.95	□□□□□ -1.78
TRP4	YDR354W	FKS1	P38631	1876 aa	Known RBP	3.94	□□□□□ -1.78
TRP4	YDR354W	RNR2	P09938	399 aa	Known RBP	3.94	□□□□□ -1.78
TRP4	YDR354W	ARO2	P28777	376 aa	Known RBP	3.94	□□□□□ -1.78
TRP4	YDR354W	NIP100	P33420	868 aa		3.94	□□□□□ -1.78
TRP4	YDR354W	SDH3	P33421	198 aa		3.94	□□□□□ -1.78
TRP4	YDR354W	CCT2	P39076	527 aa	Known RBP	3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms