RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W MSH5Q12175 901 aa3.61□□□□□ -1.83
TSR1YDL060W MRPL23Q12487 163 aaPredicted RBP3.61□□□□□ -1.83
TSR1YDL060W ZPS1Q12512 249 aa3.61□□□□□ -1.83
TSR1YDL060W RAD61Q99359 647 aa3.61□□□□□ -1.83
TSR1YDL060W CBP2P03874 630 aaPredicted RBP3.61□□□□□ -1.83
TSR1YDL060W SSC1P0CS90 654 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W MATALPHA2P0CY08 210 aa3.61□□□□□ -1.83
TSR1YDL060W HMLALPHA2P0CY09 210 aa3.61□□□□□ -1.83
TSR1YDL060W STE4P18851 423 aa3.61□□□□□ -1.83
TSR1YDL060W CLB2P24869 491 aa3.61□□□□□ -1.83
TSR1YDL060W IMG1P25626 169 aa3.61□□□□□ -1.83
TSR1YDL060W CNE1P27825 502 aa3.61□□□□□ -1.83
TSR1YDL060W SIP1P32578 815 aa3.61□□□□□ -1.83
TSR1YDL060W HES1P35843 434 aa3.61□□□□□ -1.83
TSR1YDL060W YKT6P36015 200 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W NUP133P36161 1157 aa3.61□□□□□ -1.83
TSR1YDL060W PDX3P38075 228 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W ERG7P38604 731 aa3.61□□□□□ -1.83
TSR1YDL060W RMD9P53140 646 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W ADE16P54113 591 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W UBP16Q02863 499 aa3.61□□□□□ -1.83
TSR1YDL060W SMP3Q04174 516 aa3.61□□□□□ -1.83
TSR1YDL060W SEG1Q04279 960 aa3.61□□□□□ -1.83
TSR1YDL060W GFD1Q04839 188 aaKnown RBP3.61□□□□□ -1.83
TSR1YDL060W GSH2Q08220 491 aa3.61□□□□□ -1.83
TSR1YDL060W HXK2P04807 486 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W CBP1P07252 654 aa3.6□□□□□ -1.83
TSR1YDL060W YPK1P12688 680 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W SRV2P17555 526 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W PRP2P20095 876 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W NUP1P20676 1076 aa3.6□□□□□ -1.83
TSR1YDL060W CDC10P25342 322 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W GSH1P32477 678 aa3.6□□□□□ -1.83
TSR1YDL060W GCG1P32656 232 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W RFT1P38206 574 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W ZTA1P38230 334 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W MSR1P38714 643 aa3.6□□□□□ -1.83
TSR1YDL060W RPH1P39956 796 aa3.6□□□□□ -1.83
TSR1YDL060W YFR018CP43599 363 aa3.6□□□□□ -1.83
TSR1YDL060W FAR3P46671 204 aa3.6□□□□□ -1.83
TSR1YDL060W DPB11P47027 764 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W UBX6P47049 396 aa3.6□□□□□ -1.83
TSR1YDL060W SSN8P47821 323 aa3.6□□□□□ -1.83
TSR1YDL060W USE1P53146 245 aa3.6□□□□□ -1.83
TSR1YDL060W UTP6Q02354 440 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W RNY1Q02933 434 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W GPI17Q04080 534 aa3.6□□□□□ -1.83
TSR1YDL060W CUR1Q06469 252 aa3.6□□□□□ -1.83
TSR1YDL060W YFH1Q07540 174 aa3.6□□□□□ -1.83
TSR1YDL060W YOL159CQ08300 171 aa3.6□□□□□ -1.83
TSR1YDL060W SGT1Q08446 395 aa3.6□□□□□ -1.83
TSR1YDL060W TIP41Q12199 356 aa3.6□□□□□ -1.83
TSR1YDL060W SFG1Q12507 346 aa3.6□□□□□ -1.83
TSR1YDL060W NOT5Q12514 560 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W YIL002W-AQ3E7Z5 69 aa3.6□□□□□ -1.83
TSR1YDL060W VPS63O13549 108 aa3.6□□□□□ -1.83
TSR1YDL060W THR4P16120 514 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W PTP1P25044 335 aa3.6□□□□□ -1.83
TSR1YDL060W ELO2P25358 347 aa3.6□□□□□ -1.83
TSR1YDL060W NTG1P31378 399 aa3.6□□□□□ -1.83
TSR1YDL060W RPT5P33297 434 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W VPS21P36017 210 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W MNN9P39107 395 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W ELO1P39540 310 aa3.6□□□□□ -1.83
TSR1YDL060W UTP18P40362 594 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W BNA3P47039 444 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W KAP114P53067 1004 aa3.6□□□□□ -1.83
TSR1YDL060W YNL092WP53934 400 aa3.6□□□□□ -1.83
TSR1YDL060W KTR5P53966 522 aaPredicted RBP3.6□□□□□ -1.83
TSR1YDL060W SMA1Q02651 245 aa3.6□□□□□ -1.83
TSR1YDL060W ELP3Q02908 557 aaKnown RBP3.6□□□□□ -1.83
TSR1YDL060W HER2Q03557 464 aa3.6□□□□□ -1.83
TSR1YDL060W RIM13Q03792 727 aa3.6□□□□□ -1.83
TSR1YDL060W YMR160WQ03823 816 aa3.6□□□□□ -1.83
TSR1YDL060W GLO2Q05584 274 aa3.6□□□□□ -1.83
TSR1YDL060W COQ9Q05779 260 aa3.6□□□□□ -1.83
TSR1YDL060W TY3A-GQ12173 290 aa3.6□□□□□ -1.83
TSR1YDL060W INP53Q12271 1107 aa3.6□□□□□ -1.83
TSR1YDL060W NCA2Q12374 616 aa3.6□□□□□ -1.83
TSR1YDL060W YBR298C-AQ8TGK4 73 aa3.6□□□□□ -1.83
TSR1YDL060W TY3A-IQ99219 290 aa3.6□□□□□ -1.83
TSR1YDL060W POM152P39685 1337 aa3.6□□□□□ -1.83
TSR1YDL060W ARG81P05085 880 aa3.59□□□□□ -1.83
TSR1YDL060W SCH9P11792 824 aaKnown RBP3.59□□□□□ -1.83
TSR1YDL060W YJU2P28320 278 aaPredicted RBP3.59□□□□□ -1.83
TSR1YDL060W ITR2P30606 609 aa3.59□□□□□ -1.83
TSR1YDL060W SIN4P32259 974 aa3.59□□□□□ -1.83
TSR1YDL060W NDI1P32340 513 aa3.59□□□□□ -1.83
TSR1YDL060W CCL1P37366 393 aa3.59□□□□□ -1.83
TSR1YDL060W YBR242WP38331 238 aa3.59□□□□□ -1.83
TSR1YDL060W IMD2P38697 523 aaKnown RBP3.59□□□□□ -1.83
TSR1YDL060W UIP3P39547 235 aa3.59□□□□□ -1.83
TSR1YDL060W SSO2P39926 295 aa3.59□□□□□ -1.83
TSR1YDL060W ECM10P39987 644 aa3.59□□□□□ -1.83
TSR1YDL060W RPA34P47006 233 aaPredicted RBP3.59□□□□□ -1.83
TSR1YDL060W TAX4P47030 604 aa3.59□□□□□ -1.83
TSR1YDL060W YGL117WP53133 265 aa3.59□□□□□ -1.83
TSR1YDL060W LSC1P53598 329 aaKnown RBP3.59□□□□□ -1.83
TSR1YDL060W PRM1P53835 661 aa3.59□□□□□ -1.83
TSR1YDL060W ALE1Q08548 619 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms