RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	HXT9	P40885	567 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	IAH1	P41734	238 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	CUL3	P53202	744 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	YGR250C	P53316	781 aa	Known RBP	4.19	□□□□□ -1.74
SHE1	YBL031W	ARK1	P53974	638 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	SLT2	Q00772	484 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	TOF2	Q02208	771 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	MRPL1	Q04599	285 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	YDR222W	Q04925	415 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	COQ9	Q05779	260 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	VTA1	Q06263	330 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	SUE1	Q06524	206 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	RDR1	Q08904	546 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	RUP1	Q12242	671 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	HRT3	Q12347	344 aa		4.19	□□□□□ -1.74
SHE1	YBL031W	CMD1	P06787	147 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	IMA3	P0CW40	589 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	IMA4	P0CW41	589 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YER190C-B	P0CX94	160 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YEL077W-A	P0CX95	160 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YGR296C-B	P0CX96	160 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YPL283W-B	P0CX97	160 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YPR204C-A	P0CX98	160 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	TAL1	P15019	335 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	AIM17	P23180	465 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	PTP1	P25044	335 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	MGT1	P26188	188 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	SNC1	P31109	117 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	RIM1	P32445	135 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	PXA2	P34230	853 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YHR210C	P38893	341 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	SEC28	P40509	296 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	DIM1	P41819	318 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	SNG1	P46950	547 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	TMA22	P47089	198 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	EAF6	P47128	113 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	MND1	P53102	219 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YNL234W	P53857	426 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	DUG3	P53871	357 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SHE1	YBL031W	RPL15B	P54780	204 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	STP1	Q00947	519 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	YVH1	Q02256	364 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	PPM1	Q04081	328 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	TAF9	Q05027	157 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	ATG17	Q06410	417 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	GSH2	Q08220	491 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	IMA2	Q08295	589 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	SPE3	Q12074	293 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	TY3A-G	Q12173	290 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	BRR1	Q99177	341 aa	Predicted RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	TY3A-I	Q99219	290 aa		4.18	□□□□□ -1.74
SHE1	YBL031W	FAS2	P19097	1887 aa	Known RBP	4.18	□□□□□ -1.74
SHE1	YBL031W	YPR089W	O13585	888 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SHE1	YBL031W	CBF1	P17106	351 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	CDC42	P19073	191 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	URA4	P20051	364 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	PRP2	P20095	876 aa	Predicted RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	GID7	P25569	745 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	URA7	P28274	579 aa	Known RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	PMT1	P33775	817 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	ROT2	P38138	954 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	SRP72	P38688	640 aa	Known RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	PCL6	P40038	420 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	SCC4	P40090	624 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	GVP36	P40531	326 aa	Known RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	SSU1	P41930	458 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	DLD2	P46681	530 aa	Known RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	PKP2	P53170	491 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	SMM1	P53720	384 aa	Known RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	DSL1	P53847	754 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	YNL146W	P53906	100 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	FMN1	Q03778	218 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	RPC11	Q04307	110 aa	Predicted RBP	4.17	□□□□□ -1.74
SHE1	YBL031W	SSK1	Q07084	712 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	RRD2	Q12461	358 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	YOL159C-A	Q3E769	90 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	BI3	Q9ZZW7	517 aa		4.17	□□□□□ -1.74
SHE1	YBL031W	PEP4	P07267	405 aa	Known RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	RPL31B	P0C2H9	113 aa	Known RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	SNA3	P14359	133 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	SEC1	P30619	724 aa	Known RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	VMA8	P32610	256 aa	Known RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	SHP1	P34223	423 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YPK3	P38070	525 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	DUG2	P38149	878 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YBR032W	P38223	100 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YBR062C	P38239	180 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	SHE3	P38272	425 aa	Known RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	SMF2	P38778	549 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	FLO5	P38894	1075 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YJL068C	P40363	299 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	AIM22	P47051	409 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YJR054W	P47114	497 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YJR154W	P47181	346 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	MNP1	P53163	194 aa	Predicted RBP	4.16	□□□□□ -1.74
SHE1	YBL031W	COS6	P53344	381 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	IZH1	Q03419	316 aa		4.16	□□□□□ -1.74
SHE1	YBL031W	YDR131C	Q03899	556 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms