RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 HERC6Q8IVU3 1022 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 CCDC12Q8WUD4 166 aaPredicted RBP20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 ZMYND12Q9H0C1 365 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 PRDM12Q9H4Q4 367 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 KCNH7Q9NS40 1196 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 SETD4Q9NVD3 440 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 NFASCO94856 1347 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 NRCAMQ92823 1304 aa20.49■□□□□ 0.87
CHMP2A-203ENST00000597209 RSPH10B2B2RC85 870 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 KIF28PB7ZC32 967 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 RSPH10BP0C881 870 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 MYOGP15173 224 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 THPOP40225 353 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 WDR5P61964 334 aaKnown RBP20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 NTRK3Q16288 839 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 PKN1Q16512 942 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 CEP55Q53EZ4 464 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 NIPA1Q7RTP0 329 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 TM6SF1Q9BZW5 370 aa20.48■□□□□ 0.87
CHMP2A-203ENST00000597209 MEIS1O00470 390 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 LGR5O75473 907 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 IFNAR1P17181 557 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 PDIA3P30101 505 aaKnown RBP20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 IKBKEQ14164 716 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 CYP2W1Q8TAV3 490 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 PGBD1Q96JS3 809 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 RNF26Q9BY78 433 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 SMARCAD1Q9H4L7 1026 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 C6orf50Q9HD87 102 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 JPH1Q9HDC5 661 aaPredicted RBP20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 TMEM260Q9NX78 707 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 ERAP1Q9NZ08 941 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 SLC9A2Q9UBY0 812 aa20.47■□□□□ 0.87
CHMP2A-203ENST00000597209 CYP3A4P08684 503 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 TCTN1Q2MV58 587 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 FAM26DQ5JW98 314 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 RPAINQ86UA6 219 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 LMBR1Q8WVP7 490 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 CRYGNQ8WXF5 182 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 SDF4Q9BRK5 362 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 PKD2L1Q9P0L9 805 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 CYP46A1Q9Y6A2 500 aa20.46■□□□□ 0.87
CHMP2A-203ENST00000597209 CA3P07451 260 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 ARP10275 920 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 GNA11P29992 359 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 ARHGAP4P98171 946 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 AKAP17AQ02040 695 aaKnown RBP20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 TOB2Q14106 344 aaPredicted RBP20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 AGO4Q9HCK5 861 aaKnown RBP20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 CDH23Q9H251 3354 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 PTPRSQ13332 1948 aa20.45■□□□□ 0.86
CHMP2A-203ENST00000597209 DLL1O00548 723 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 ZNF76P36508 570 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 MKRN4PQ13434 485 aaPredicted RBP20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 ADGRE1Q14246 886 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 PLEKHG4Q58EX7 1191 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 JAKMIP3Q5VZ66 844 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 TAF2Q6P1X5 1199 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 GLG1Q92896 1179 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 PHKBQ93100 1093 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 ZNF274Q96GC6 653 aaPredicted RBP20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 PCYT2Q99447 389 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 CHD9Q3L8U1 2897 aa20.44■□□□□ 0.86
CHMP2A-203ENST00000597209 MBLAC1A4D2B0 266 aaPredicted RBP20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 TLL1O43897 1013 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 ATG7O95352 703 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 DEFB103AP81534 67 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 PPFIA1Q13136 1202 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 ITGB3BPQ13352 177 aaPredicted RBP20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 PLPPR4Q7Z2D5 763 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 REXO1Q8N1G1 1221 aaKnown RBP20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 CCDC148Q8NFR7 591 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 DBF4BQ8NFT6 615 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 AZI2Q9H6S1 392 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 SH3GLB2Q9NR46 395 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 KAT6AQ92794 2004 aa20.43■□□□□ 0.86
CHMP2A-203ENST00000597209 RRN3P2A6NIE6 340 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 FAM86B1E9PN63 330 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 GJB5O95377 273 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 FAM86B2P0C5J1 330 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 ACTR2P61160 394 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 CCT2P78371 535 aaKnown RBP20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 TAP1Q03518 808 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 GRIK4Q16099 956 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 SEPT8Q92599 483 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 SLC26A6Q9BXS9 759 aa20.42■□□□□ 0.86
CHMP2A-203ENST00000597209 IGLV3-22A0A075B6J6 115 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 IGKV6D-21A0A0A0MT36 114 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 POU3F3P20264 500 aaPredicted RBP20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 MARK3P27448 753 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 MARCH8Q5T0T0 291 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 PLA2G4DQ86XP0 818 aa20.41■□□□□ 0.86
CHMP2A-203ENST00000597209 APBB2Q92870 758 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms