RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 DOCK3Q8IZD9 2030 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 MYH7BA7E2Y1 1941 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 LCTP09848 1927 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 A6NJR5 290 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 ZEB2O60315 1214 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 ATG7O95352 703 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 MUTP22033 750 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
SMAD4-214ENST00000592186 TXLNAP40222 546 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 UBA7P41226 1012 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 GJA9P57773 515 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 ACTR2P61160 394 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 EPHA7Q15375 998 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 IL17AQ16552 155 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 KRT79Q5XKE5 535 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 HAUS3Q68CZ6 603 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 MIS18BP1Q6P0N0 1132 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 MIER3Q7Z3K6 550 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 TLK2Q86UE8 772 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 TMEM87AQ8NBN3 555 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 DISC1Q9NRI5 854 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 PCDHA7Q9UN72 937 aa12□□□□□ -0.49
SMAD4-214ENST00000592186 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 A0A1W2PQ27 194 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 A0A1W2PQ64 194 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 A0A1W2PQD8 194 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 DDX39AO00148 427 aaKnown RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 CCNE2O96020 404 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 P4HBP07237 508 aaKnown RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 CCL5P13501 91 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 CMA1P23946 247 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 SLC26A2P50443 739 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 SPIRE1Q08AE8 756 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 DGKDQ16760 1214 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 AXDND1Q5T1B0 1012 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 NCAPH2Q6IBW4 605 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 ABHD15Q6UXT9 468 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 RNF180Q86T96 592 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 UIMC1Q96RL1 719 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 GPR20Q99678 358 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 POLR3CQ9BUI4 534 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 RNF208Q9H0X6 261 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 CSRNP2Q9H175 543 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 UPF3AQ9H1J1 476 aaKnown RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 UNC45AQ9H3U1 944 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 AZI2Q9H6S1 392 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 XPNPEP3Q9NQH7 507 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
SMAD4-214ENST00000592186 ZSWIM8A7E2V4 1837 aa11.99□□□□□ -0.49
SMAD4-214ENST00000592186 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 CHMP2AO43633 222 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 SUPT20HL2P0C7V6 817 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 HOXD8P13378 290 aaPredicted RBP11.98□□□□□ -0.49
SMAD4-214ENST00000592186 RPA1P27694 616 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 HSDL1Q3SXM5 330 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 LHX8Q68G74 356 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 PLPPR4Q7Z2D5 763 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 PCSK9Q8NBP7 692 aaKnown RBP11.98□□□□□ -0.49
SMAD4-214ENST00000592186 AFG1LQ8WV93 481 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 COPS5Q92905 334 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 GJA10Q969M2 543 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 ZNF333Q96JL9 665 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 HSD17B14Q9BPX1 270 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 CCSER1Q9C0I3 900 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 NT5C3AQ9H0P0 336 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 SMARCAD1Q9H4L7 1026 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 BCAS3Q9H6U6 928 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 TUFT1Q9NNX1 390 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 CCDC39Q9UFE4 941 aa11.98□□□□□ -0.49
SMAD4-214ENST00000592186 IGKV6D-21A0A0A0MT36 114 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 BACH1O14867 736 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 ADCY6O43306 1168 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 PRPF40AO75400 957 aaKnown RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 PTMSP20962 102 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 CST5P28325 142 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 TCF7P36402 384 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 STAT5BP51692 787 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 PSMC5P62195 406 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 TMEM63BQ5T3F8 832 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-214ENST00000592186 SWSAP1Q6NVH7 229 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 CABP7Q86V35 215 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 AFAP1L1Q8TED9 768 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 CDK5RAP3Q96JB5 506 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 CLIC6Q96NY7 704 aa11.97□□□□□ -0.49
SMAD4-214ENST00000592186 EIF2AK1Q9BQI3 630 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms