RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 MXRA8Q9BRK3 442 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 ANO3Q9BYT9 981 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 KCNH7Q9NS40 1196 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 SETD4Q9NVD3 440 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 MSRAQ9UJ68 235 aa16.77■□□□□ 0.28
FANCA-220ENST00000566409 MAFGO15525 162 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 FOSP01100 380 aaPredicted RBP16.76■□□□□ 0.27
FANCA-220ENST00000566409 ARP10275 920 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 ACTN1P12814 892 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 SREBF1P36956 1147 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
FANCA-220ENST00000566409 ERICH6BQ5W0A0 696 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 CRYGNQ8WXF5 182 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 ZMYND12Q9H0C1 365 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
FANCA-220ENST00000566409 PCDHA11Q9Y5I1 949 aa16.76■□□□□ 0.27
FANCA-220ENST00000566409 FOSL2P15408 326 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 THPOP40225 353 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 CEP55Q53EZ4 464 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 JAKMIP3Q5VZ66 844 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 MAFAQ8NHW3 353 aaPredicted RBP16.75■□□□□ 0.27
FANCA-220ENST00000566409 SEPT1Q8WYJ6 367 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 PCYT2Q99447 389 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 LARP6Q9BRS8 491 aaKnown RBP16.75■□□□□ 0.27
FANCA-220ENST00000566409 UPF3BQ9BZI7 483 aaKnown RBP16.75■□□□□ 0.27
FANCA-220ENST00000566409 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 PRDM12Q9H4Q4 367 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 EHMT1Q9H9B1 1298 aa16.75■□□□□ 0.27
FANCA-220ENST00000566409 ESYT2A0FGR8 921 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 MEIS1O00470 390 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 BAIAP3O94812 1187 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 IFNAR1P17181 557 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 ITGB3BPQ13352 177 aaPredicted RBP16.74■□□□□ 0.27
FANCA-220ENST00000566409 AP3B2Q13367 1082 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 TMCO2Q7Z6W1 182 aaPredicted RBP16.74■□□□□ 0.27
FANCA-220ENST00000566409 PHOSPHO2Q8TCD6 241 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 LMBR1Q8WVP7 490 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 SLC9A7Q96T83 725 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 GLT8D2Q9H1C3 349 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 AGO4Q9HCK5 861 aaKnown RBP16.74■□□□□ 0.27
FANCA-220ENST00000566409 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
FANCA-220ENST00000566409 MICAL3Q7RTP6 2002 aa16.74■□□□□ 0.27
FANCA-220ENST00000566409 SIP14410 1827 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 FAM86B1E9PN63 330 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 PARNO95453 639 aaKnown RBP16.73■□□□□ 0.27
FANCA-220ENST00000566409 FAM86B2P0C5J1 330 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
FANCA-220ENST00000566409 DEFB103AP81534 67 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 ARHGAP4P98171 946 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
FANCA-220ENST00000566409 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 JPH1Q9HDC5 661 aaPredicted RBP16.73■□□□□ 0.27
FANCA-220ENST00000566409 CYP46A1Q9Y6A2 500 aa16.73■□□□□ 0.27
FANCA-220ENST00000566409 NFASCO94856 1347 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 TTC28Q96AY4 2481 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 IGLV3-22A0A075B6J6 115 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 RSPH10B2B2RC85 870 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 EDIL3O43854 480 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 LGR5O75473 907 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 CA3P07451 260 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 CYP3A4P08684 503 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 RSPH10BP0C881 870 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 MARK3P27448 753 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
FANCA-220ENST00000566409 MARCH8Q5T0T0 291 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 RASGRP4Q8TDF6 673 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 SLC26A6Q9BXS9 759 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 SLC9A2Q9UBY0 812 aa16.72■□□□□ 0.27
FANCA-220ENST00000566409 PRRC2BQ5JSZ5 2229 aaKnown RBP16.72■□□□□ 0.27
FANCA-220ENST00000566409 NRCAMQ92823 1304 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 WDR81Q562E7 1941 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
FANCA-220ENST00000566409 CCNE2O96020 404 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 GNAT1P11488 350 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 ACTR2P61160 394 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 PPP2R2DQ66LE6 453 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 RUFY4Q6ZNE9 571 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 SPRED2Q7Z698 418 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 REXO1Q8N1G1 1221 aaKnown RBP16.71■□□□□ 0.27
FANCA-220ENST00000566409 DBF4BQ8NFT6 615 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 GLG1Q92896 1179 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 ZNF274Q96GC6 653 aaPredicted RBP16.71■□□□□ 0.27
FANCA-220ENST00000566409 UIMC1Q96RL1 719 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 SMARCAD1Q9H4L7 1026 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 C6orf50Q9HD87 102 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 ERAP1Q9NZ08 941 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 VPS54Q9P1Q0 977 aa16.71■□□□□ 0.27
FANCA-220ENST00000566409 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 ABHD14A-ACY1A0A1B0GW23 586 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 ATG7O95352 703 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 CTSHP09668 335 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 PPFIA1Q13136 1202 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 GRIK4Q16099 956 aa16.7■□□□□ 0.26
FANCA-220ENST00000566409 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms